Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 PMS2P4-201ENST00000412466 1052 ntBASIC20.53■□□□□ 0.88
TNNI3KQ59H18 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 AL355306.1-201ENST00000415580 579 ntBASIC20.53■□□□□ 0.88
TNNI3KQ59H18 AC211486.1-202ENST00000416371 468 ntBASIC20.53■□□□□ 0.88
TNNI3KQ59H18 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 ACTG1P14-201ENST00000446382 1122 ntBASIC20.53■□□□□ 0.88
TNNI3KQ59H18 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 AC211476.1-201ENST00000503899 468 ntBASIC20.53■□□□□ 0.88
TNNI3KQ59H18 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 AL139011.1-202ENST00000642063 584 ntBASIC20.53■□□□□ 0.88
TNNI3KQ59H18 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 AC106886.4-201ENST00000623557 2502 ntBASIC20.53■□□□□ 0.88
TNNI3KQ59H18 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNNI3KQ59H18 KRT8P39-201ENST00000396270 1433 ntBASIC20.53■□□□□ 0.88
TNNI3KQ59H18 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 AC004967.1-201ENST00000453589 447 ntBASIC20.52■□□□□ 0.88
TNNI3KQ59H18 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 AL691403.2-201ENST00000618460 490 ntBASIC20.52■□□□□ 0.88
TNNI3KQ59H18 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNNI3KQ59H18 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TNNI3KQ59H18 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TNNI3KQ59H18 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TNNI3KQ59H18 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TNNI3KQ59H18 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TNNI3KQ59H18 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.52■□□□□ 0.87
TNNI3KQ59H18 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TNNI3KQ59H18 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.51■□□□□ 0.87
TNNI3KQ59H18 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TNNI3KQ59H18 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms