Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.75■□□□□ 0.91
DDR1Q08345 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDR1Q08345 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
DDR1Q08345 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDR1Q08345 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDR1Q08345 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDR1Q08345 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
DDR1Q08345 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.75■□□□□ 0.91
DDR1Q08345 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDR1Q08345 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
DDR1Q08345 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDR1Q08345 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDR1Q08345 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDR1Q08345 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.74■□□□□ 0.91
DDR1Q08345 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.74■□□□□ 0.91
DDR1Q08345 TMEM14DP-201ENST00000422205 345 ntBASIC20.74■□□□□ 0.91
DDR1Q08345 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.74■□□□□ 0.91
DDR1Q08345 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.74■□□□□ 0.91
DDR1Q08345 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDR1Q08345 AC011495.1-201ENST00000498085 584 ntBASIC20.74■□□□□ 0.91
DDR1Q08345 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.74■□□□□ 0.91
DDR1Q08345 AC108860.2-201ENST00000562760 2183 ntBASIC20.74■□□□□ 0.91
DDR1Q08345 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.74■□□□□ 0.91
DDR1Q08345 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDR1Q08345 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.74■□□□□ 0.91
DDR1Q08345 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.74■□□□□ 0.91
DDR1Q08345 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.74■□□□□ 0.91
DDR1Q08345 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.74■□□□□ 0.91
DDR1Q08345 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDR1Q08345 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
DDR1Q08345 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDR1Q08345 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDR1Q08345 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
DDR1Q08345 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.73■□□□□ 0.91
DDR1Q08345 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDR1Q08345 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDR1Q08345 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.73■□□□□ 0.91
DDR1Q08345 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDR1Q08345 AC004408.2-201ENST00000623613 2777 ntBASIC20.73■□□□□ 0.91
DDR1Q08345 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.73■□□□□ 0.91
DDR1Q08345 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDR1Q08345 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
DDR1Q08345 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.73■□□□□ 0.91
DDR1Q08345 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDR1Q08345 AC114501.2-201ENST00000439631 535 ntBASIC20.73■□□□□ 0.91
DDR1Q08345 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDR1Q08345 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.73■□□□□ 0.91
DDR1Q08345 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.73■□□□□ 0.91
DDR1Q08345 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.73■□□□□ 0.91
DDR1Q08345 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.73■□□□□ 0.91
DDR1Q08345 AL033527.4-201ENST00000641026 673 ntBASIC20.73■□□□□ 0.91
DDR1Q08345 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.73■□□□□ 0.91
DDR1Q08345 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.73■□□□□ 0.91
DDR1Q08345 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.73■□□□□ 0.91
DDR1Q08345 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDR1Q08345 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.73■□□□□ 0.91
DDR1Q08345 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
DDR1Q08345 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDR1Q08345 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.73■□□□□ 0.91
DDR1Q08345 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDR1Q08345 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDR1Q08345 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.72■□□□□ 0.91
DDR1Q08345 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.72■□□□□ 0.91
DDR1Q08345 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
DDR1Q08345 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
DDR1Q08345 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDR1Q08345 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DDR1Q08345 AC092658.1-201ENST00000505836 891 ntBASIC20.72■□□□□ 0.91
DDR1Q08345 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.72■□□□□ 0.91
DDR1Q08345 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.72■□□□□ 0.91
DDR1Q08345 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.72■□□□□ 0.91
DDR1Q08345 AL512343.1-201ENST00000605837 169 ntBASIC20.72■□□□□ 0.91
DDR1Q08345 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDR1Q08345 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.72■□□□□ 0.91
DDR1Q08345 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.72■□□□□ 0.91
DDR1Q08345 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDR1Q08345 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDR1Q08345 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDR1Q08345 AL671710.1-201ENST00000610245 2349 ntBASIC20.72■□□□□ 0.91
DDR1Q08345 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.72■□□□□ 0.91
DDR1Q08345 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDR1Q08345 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.72■□□□□ 0.91
DDR1Q08345 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDR1Q08345 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDR1Q08345 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDR1Q08345 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDR1Q08345 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
DDR1Q08345 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDR1Q08345 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.71■□□□□ 0.91
DDR1Q08345 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDR1Q08345 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.71■□□□□ 0.91
DDR1Q08345 TTTY23B-201ENST00000442790 549 ntBASIC20.71■□□□□ 0.91
DDR1Q08345 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDR1Q08345 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.71■□□□□ 0.91
DDR1Q08345 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
DDR1Q08345 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.71■□□□□ 0.91
DDR1Q08345 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.71■□□□□ 0.91
DDR1Q08345 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.71■□□□□ 0.91
DDR1Q08345 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
DDR1Q08345 CTBP2P3-201ENST00000585629 1255 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms