Protein–RNA interactions for Protein: Q01959

SLC6A3, Sodium-dependent dopamine transporter, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A3Q01959 AL139011.1-202ENST00000642063 584 ntBASIC17.67■□□□□ 0.42
SLC6A3Q01959 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A3Q01959 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A3Q01959 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A3Q01959 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A3Q01959 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A3Q01959 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
SLC6A3Q01959 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A3Q01959 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A3Q01959 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
SLC6A3Q01959 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A3Q01959 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A3Q01959 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A3Q01959 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A3Q01959 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A3Q01959 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A3Q01959 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A3Q01959 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A3Q01959 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A3Q01959 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A3Q01959 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 AC087641.1-201ENST00000557561 1021 ntBASIC17.66■□□□□ 0.42
SLC6A3Q01959 AC096734.2-201ENST00000562054 433 ntBASIC17.66■□□□□ 0.42
SLC6A3Q01959 CYP2A7P1-201ENST00000595391 815 ntBASIC17.66■□□□□ 0.42
SLC6A3Q01959 AC064836.3-201ENST00000607928 673 ntBASIC17.66■□□□□ 0.42
SLC6A3Q01959 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A3Q01959 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A3Q01959 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A3Q01959 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A3Q01959 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC6A3Q01959 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A3Q01959 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
SLC6A3Q01959 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A3Q01959 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A3Q01959 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A3Q01959 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A3Q01959 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC6A3Q01959 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A3Q01959 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A3Q01959 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC6A3Q01959 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC6A3Q01959 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A3Q01959 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
SLC6A3Q01959 AC007967.2-201ENST00000432613 625 ntBASIC17.65■□□□□ 0.42
SLC6A3Q01959 RHOQP3-201ENST00000437982 621 ntBASIC17.65■□□□□ 0.42
SLC6A3Q01959 AL513480.1-201ENST00000451731 511 ntBASIC17.65■□□□□ 0.42
SLC6A3Q01959 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.65■□□□□ 0.42
SLC6A3Q01959 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC6A3Q01959 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC6A3Q01959 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.65■□□□□ 0.42
SLC6A3Q01959 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC6A3Q01959 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SLC6A3Q01959 MIR4515-201ENST00000584082 81 ntBASIC17.65■□□□□ 0.42
SLC6A3Q01959 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC6A3Q01959 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A3Q01959 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.65■□□□□ 0.42
SLC6A3Q01959 AP001350.2-201ENST00000625104 1094 ntBASIC17.65■□□□□ 0.42
SLC6A3Q01959 AC010507.1-201ENST00000633895 436 ntBASIC17.65■□□□□ 0.42
SLC6A3Q01959 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A3Q01959 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A3Q01959 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC6A3Q01959 SNX33P1-201ENST00000592116 1762 ntBASIC17.65■□□□□ 0.42
SLC6A3Q01959 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A3Q01959 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC6A3Q01959 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A3Q01959 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A3Q01959 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A3Q01959 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A3Q01959 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SLC6A3Q01959 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.64■□□□□ 0.42
SLC6A3Q01959 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SLC6A3Q01959 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SLC6A3Q01959 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A3Q01959 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SLC6A3Q01959 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A3Q01959 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A3Q01959 AC012569.1-201ENST00000591191 1524 ntBASIC17.64■□□□□ 0.41
SLC6A3Q01959 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A3Q01959 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A3Q01959 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SLC6A3Q01959 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A3Q01959 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SLC6A3Q01959 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC6A3Q01959 KRT18P2-201ENST00000447938 1258 ntBASIC17.64■□□□□ 0.41
SLC6A3Q01959 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms