Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX4P78413 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.63■□□□□ 0.41
IRX4P78413 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.63■□□□□ 0.41
IRX4P78413 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IRX4P78413 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
IRX4P78413 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.63■□□□□ 0.41
IRX4P78413 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.63■□□□□ 0.41
IRX4P78413 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.63■□□□□ 0.41
IRX4P78413 KRT18P65-201ENST00000439811 1286 ntBASIC17.63■□□□□ 0.41
IRX4P78413 BX005266.1-201ENST00000473402 457 ntBASIC17.63■□□□□ 0.41
IRX4P78413 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.63■□□□□ 0.41
IRX4P78413 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.63■□□□□ 0.41
IRX4P78413 AC005829.1-201ENST00000570002 483 ntBASIC17.63■□□□□ 0.41
IRX4P78413 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.63■□□□□ 0.41
IRX4P78413 AC116407.2-201ENST00000613639 860 ntBASIC17.63■□□□□ 0.41
IRX4P78413 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IRX4P78413 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX4P78413 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.63■□□□□ 0.41
IRX4P78413 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IRX4P78413 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
IRX4P78413 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX4P78413 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IRX4P78413 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX4P78413 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IRX4P78413 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
IRX4P78413 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
IRX4P78413 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX4P78413 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IRX4P78413 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX4P78413 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
IRX4P78413 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.62■□□□□ 0.41
IRX4P78413 AC106886.4-201ENST00000623557 2502 ntBASIC17.62■□□□□ 0.41
IRX4P78413 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IRX4P78413 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.62■□□□□ 0.41
IRX4P78413 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.62■□□□□ 0.41
IRX4P78413 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
IRX4P78413 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX4P78413 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX4P78413 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.62■□□□□ 0.41
IRX4P78413 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
IRX4P78413 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX4P78413 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.62■□□□□ 0.41
IRX4P78413 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
IRX4P78413 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
IRX4P78413 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.62■□□□□ 0.41
IRX4P78413 KRT18P2-201ENST00000447938 1258 ntBASIC17.62■□□□□ 0.41
IRX4P78413 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.62■□□□□ 0.41
IRX4P78413 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
IRX4P78413 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.62■□□□□ 0.41
IRX4P78413 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.62■□□□□ 0.41
IRX4P78413 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.62■□□□□ 0.41
IRX4P78413 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.62■□□□□ 0.41
IRX4P78413 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.62■□□□□ 0.41
IRX4P78413 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.62■□□□□ 0.41
IRX4P78413 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.62■□□□□ 0.41
IRX4P78413 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.62■□□□□ 0.41
IRX4P78413 MIR1199-201ENST00000621445 119 ntBASIC17.62■□□□□ 0.41
IRX4P78413 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX4P78413 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX4P78413 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX4P78413 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.62■□□□□ 0.41
IRX4P78413 AC097374.2-201ENST00000618617 1306 ntBASIC17.62■□□□□ 0.41
IRX4P78413 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX4P78413 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.62■□□□□ 0.41
IRX4P78413 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
IRX4P78413 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX4P78413 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX4P78413 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.62■□□□□ 0.41
IRX4P78413 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IRX4P78413 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.61■□□□□ 0.41
IRX4P78413 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.61■□□□□ 0.41
IRX4P78413 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.61■□□□□ 0.41
IRX4P78413 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
IRX4P78413 AC112698.1-201ENST00000510299 916 ntBASIC17.61■□□□□ 0.41
IRX4P78413 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.61■□□□□ 0.41
IRX4P78413 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.61■□□□□ 0.41
IRX4P78413 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.61■□□□□ 0.41
IRX4P78413 SNHG9-202ENST00000564014 471 ntBASIC17.61■□□□□ 0.41
IRX4P78413 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
IRX4P78413 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.61■□□□□ 0.41
IRX4P78413 AC005593.1-201ENST00000624894 515 ntBASIC17.61■□□□□ 0.41
IRX4P78413 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.61■□□□□ 0.41
IRX4P78413 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.61■□□□□ 0.41
IRX4P78413 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.61■□□□□ 0.41
IRX4P78413 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
IRX4P78413 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX4P78413 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.61■□□□□ 0.41
IRX4P78413 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms