Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TPM4P67936 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC19■□□□□ 0.63
TPM4P67936 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19■□□□□ 0.63
TPM4P67936 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19■□□□□ 0.63
TPM4P67936 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
TPM4P67936 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 AC092364.2-201ENST00000596710 2692 ntBASIC18.99■□□□□ 0.63
TPM4P67936 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.99■□□□□ 0.63
TPM4P67936 AL645728.1-201ENST00000366221 2101 ntBASIC18.99■□□□□ 0.63
TPM4P67936 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.99■□□□□ 0.63
TPM4P67936 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.99■□□□□ 0.63
TPM4P67936 VENTXP5-201ENST00000523979 775 ntBASIC18.99■□□□□ 0.63
TPM4P67936 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 TMEM191A-211ENST00000637163 1067 ntBASIC18.99■□□□□ 0.63
TPM4P67936 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TPM4P67936 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
TPM4P67936 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.99■□□□□ 0.63
TPM4P67936 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.99■□□□□ 0.63
TPM4P67936 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 AC007950.2-201ENST00000615045 2347 ntBASIC18.99■□□□□ 0.63
TPM4P67936 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM4P67936 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.98■□□□□ 0.63
TPM4P67936 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TPM4P67936 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.98■□□□□ 0.63
TPM4P67936 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.98■□□□□ 0.63
TPM4P67936 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 KLF4P1-201ENST00000412782 1185 ntBASIC18.98■□□□□ 0.63
TPM4P67936 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.98■□□□□ 0.63
TPM4P67936 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.98■□□□□ 0.63
TPM4P67936 RNF126P1-202ENST00000569893 925 ntBASIC18.98■□□□□ 0.63
TPM4P67936 AL138831.2-201ENST00000606564 490 ntBASIC18.98■□□□□ 0.63
TPM4P67936 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TPM4P67936 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
TPM4P67936 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.98■□□□□ 0.63
TPM4P67936 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.98■□□□□ 0.63
TPM4P67936 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TPM4P67936 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TPM4P67936 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.98■□□□□ 0.63
TPM4P67936 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM4P67936 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
TPM4P67936 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC18.97■□□□□ 0.63
TPM4P67936 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TPM4P67936 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.97■□□□□ 0.63
TPM4P67936 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.97■□□□□ 0.63
TPM4P67936 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM4P67936 AC112907.2-201ENST00000448639 330 ntBASIC18.97■□□□□ 0.63
TPM4P67936 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.97■□□□□ 0.63
TPM4P67936 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.97■□□□□ 0.63
TPM4P67936 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms