Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.75■□□□□ 0.43
USP46P62068 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
USP46P62068 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
USP46P62068 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.75■□□□□ 0.43
USP46P62068 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.75■□□□□ 0.43
USP46P62068 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.75■□□□□ 0.43
USP46P62068 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.75■□□□□ 0.43
USP46P62068 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.75■□□□□ 0.43
USP46P62068 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.75■□□□□ 0.43
USP46P62068 AC079781.4-201ENST00000641908 219 ntBASIC17.75■□□□□ 0.43
USP46P62068 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.75■□□□□ 0.43
USP46P62068 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.75■□□□□ 0.43
USP46P62068 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 TOP3BP1-201ENST00000420768 1380 ntBASIC17.75■□□□□ 0.43
USP46P62068 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
USP46P62068 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.75■□□□□ 0.43
USP46P62068 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
USP46P62068 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
USP46P62068 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP46P62068 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.75■□□□□ 0.43
USP46P62068 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.74■□□□□ 0.43
USP46P62068 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USP46P62068 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
USP46P62068 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
USP46P62068 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
USP46P62068 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.74■□□□□ 0.43
USP46P62068 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USP46P62068 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
USP46P62068 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
USP46P62068 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.74■□□□□ 0.43
USP46P62068 AC140658.5-201ENST00000438532 169 ntBASIC17.74■□□□□ 0.43
USP46P62068 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.74■□□□□ 0.43
USP46P62068 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
USP46P62068 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC17.74■□□□□ 0.43
USP46P62068 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.74■□□□□ 0.43
USP46P62068 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.74■□□□□ 0.43
USP46P62068 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.74■□□□□ 0.43
USP46P62068 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 AC099522.2-201ENST00000607001 744 ntBASIC17.74■□□□□ 0.43
USP46P62068 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.74■□□□□ 0.43
USP46P62068 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.74■□□□□ 0.43
USP46P62068 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
USP46P62068 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.74■□□□□ 0.43
USP46P62068 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
USP46P62068 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
USP46P62068 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP46P62068 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 CICP6-201ENST00000457191 2729 ntBASIC17.73■□□□□ 0.43
USP46P62068 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
USP46P62068 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.73■□□□□ 0.43
USP46P62068 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.73■□□□□ 0.43
USP46P62068 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 AC254562.1-201ENST00000417586 456 ntBASIC17.73■□□□□ 0.43
USP46P62068 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.73■□□□□ 0.43
USP46P62068 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
USP46P62068 SNHG9-202ENST00000564014 471 ntBASIC17.73■□□□□ 0.43
USP46P62068 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.73■□□□□ 0.43
USP46P62068 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.73■□□□□ 0.43
USP46P62068 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.73■□□□□ 0.43
USP46P62068 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms