Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH13P55290 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH13P55290 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CDH13P55290 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
CDH13P55290 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH13P55290 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CDH13P55290 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH13P55290 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH13P55290 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CDH13P55290 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.56■□□□□ 0.24
CDH13P55290 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDH13P55290 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CDH13P55290 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CDH13P55290 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CDH13P55290 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 AP002414.1-201ENST00000391405 1147 ntBASIC16.56■□□□□ 0.24
CDH13P55290 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH13P55290 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.56■□□□□ 0.24
CDH13P55290 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.56■□□□□ 0.24
CDH13P55290 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH13P55290 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH13P55290 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH13P55290 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDH13P55290 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH13P55290 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH13P55290 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH13P55290 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH13P55290 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CDH13P55290 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH13P55290 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH13P55290 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.55■□□□□ 0.24
CDH13P55290 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH13P55290 AC064862.7-201ENST00000604520 867 ntBASIC16.55■□□□□ 0.24
CDH13P55290 AC091076.1-201ENST00000610741 619 ntBASIC16.55■□□□□ 0.24
CDH13P55290 AC010331.1-201ENST00000611423 582 ntBASIC16.55■□□□□ 0.24
CDH13P55290 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDH13P55290 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.55■□□□□ 0.24
CDH13P55290 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH13P55290 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH13P55290 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH13P55290 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH13P55290 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH13P55290 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDH13P55290 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
CDH13P55290 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH13P55290 AC243591.1-201ENST00000452967 1364 ntBASIC16.54■□□□□ 0.24
CDH13P55290 AL021920.2-201ENST00000624828 1351 ntBASIC16.54■□□□□ 0.24
CDH13P55290 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDH13P55290 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH13P55290 AC005052.1-201ENST00000625181 2492 ntBASIC16.54■□□□□ 0.24
CDH13P55290 AL590787.1-201ENST00000568856 1315 ntBASIC16.54■□□□□ 0.24
CDH13P55290 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 AL391005.1-201ENST00000623953 2435 ntBASIC16.54■□□□□ 0.24
CDH13P55290 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH13P55290 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms