Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MIR4492-201ENST00000581627 80 ntBASIC18.58■□□□□ 0.56
PMS1P54277 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PMS1P54277 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.58■□□□□ 0.56
PMS1P54277 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PMS1P54277 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.58■□□□□ 0.56
PMS1P54277 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.58■□□□□ 0.56
PMS1P54277 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PMS1P54277 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PMS1P54277 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PMS1P54277 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PMS1P54277 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
PMS1P54277 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PMS1P54277 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.58■□□□□ 0.56
PMS1P54277 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PMS1P54277 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.57■□□□□ 0.56
PMS1P54277 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PMS1P54277 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.57■□□□□ 0.56
PMS1P54277 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.57■□□□□ 0.56
PMS1P54277 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
PMS1P54277 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.57■□□□□ 0.56
PMS1P54277 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.57■□□□□ 0.56
PMS1P54277 HNRNPDP1-201ENST00000439535 754 ntBASIC18.57■□□□□ 0.56
PMS1P54277 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.57■□□□□ 0.56
PMS1P54277 EMBP1-201ENST00000458200 901 ntBASIC18.57■□□□□ 0.56
PMS1P54277 HLA-J-202ENST00000469281 1241 ntBASIC18.57■□□□□ 0.56
PMS1P54277 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PMS1P54277 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.57■□□□□ 0.56
PMS1P54277 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.57■□□□□ 0.56
PMS1P54277 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 ME2P1-201ENST00000426028 1970 ntBASIC18.57■□□□□ 0.56
PMS1P54277 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.57■□□□□ 0.56
PMS1P54277 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PMS1P54277 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.57■□□□□ 0.56
PMS1P54277 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.56■□□□□ 0.56
PMS1P54277 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.56■□□□□ 0.56
PMS1P54277 CYP2T1P-202ENST00000641596 2535 ntBASIC18.56■□□□□ 0.56
PMS1P54277 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
PMS1P54277 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PMS1P54277 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.56■□□□□ 0.56
PMS1P54277 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PMS1P54277 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.56■□□□□ 0.56
PMS1P54277 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.56■□□□□ 0.56
PMS1P54277 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.56■□□□□ 0.56
PMS1P54277 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PMS1P54277 LAGE3P1-201ENST00000425356 484 ntBASIC18.56■□□□□ 0.56
PMS1P54277 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.56■□□□□ 0.56
PMS1P54277 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.56■□□□□ 0.56
PMS1P54277 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.56■□□□□ 0.56
PMS1P54277 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.56■□□□□ 0.56
PMS1P54277 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.56■□□□□ 0.56
PMS1P54277 MPDU1-223ENST00000582151 728 ntBASIC18.56■□□□□ 0.56
PMS1P54277 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PMS1P54277 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
PMS1P54277 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PMS1P54277 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.56■□□□□ 0.56
PMS1P54277 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.56■□□□□ 0.56
PMS1P54277 AL805961.1-202ENST00000641562 540 ntBASIC18.56■□□□□ 0.56
PMS1P54277 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.56■□□□□ 0.56
PMS1P54277 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PMS1P54277 AL512652.2-201ENST00000625156 1716 ntBASIC18.56■□□□□ 0.56
PMS1P54277 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PMS1P54277 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
PMS1P54277 SLC22A20-204ENST00000530038 1673 ntBASIC18.56■□□□□ 0.56
PMS1P54277 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.56■□□□□ 0.56
PMS1P54277 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.56■□□□□ 0.56
PMS1P54277 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 PCDHA1-201ENST00000378133 2726 ntBASIC18.56■□□□□ 0.56
PMS1P54277 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PMS1P54277 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms