Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1A1P48729 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1A1P48729 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1A1P48729 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.06■□□□□ 0
CSNK1A1P48729 AL031284.1-201ENST00000419297 478 ntBASIC15.06■□□□□ 0
CSNK1A1P48729 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CSNK1A1P48729 AC087163.2-201ENST00000457299 853 ntBASIC15.06■□□□□ 0
CSNK1A1P48729 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.06■□□□□ 0
CSNK1A1P48729 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.06■□□□□ 0
CSNK1A1P48729 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CSNK1A1P48729 DUX4L17-201ENST00000557360 1267 ntBASIC15.06■□□□□ 0
CSNK1A1P48729 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.06■□□□□ 0
CSNK1A1P48729 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.06■□□□□ 0
CSNK1A1P48729 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CSNK1A1P48729 GGTLC5P-201ENST00000617623 998 ntBASIC15.06■□□□□ 0
CSNK1A1P48729 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CSNK1A1P48729 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1A1P48729 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CSNK1A1P48729 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1A1P48729 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CSNK1A1P48729 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1A1P48729 KRT8P49-201ENST00000604166 1432 ntBASIC15.06■□□□□ 0
CSNK1A1P48729 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSNK1A1P48729 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1A1P48729 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSNK1A1P48729 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CSNK1A1P48729 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1A1P48729 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
CSNK1A1P48729 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSNK1A1P48729 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSNK1A1P48729 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSNK1A1P48729 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.05■□□□□ 0
CSNK1A1P48729 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.05■□□□□ 0
CSNK1A1P48729 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CSNK1A1P48729 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CSNK1A1P48729 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.05■□□□□ 0
CSNK1A1P48729 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CSNK1A1P48729 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CSNK1A1P48729 PCDHB17P-201ENST00000539533 2393 ntBASIC15.05■□□□□ 0
CSNK1A1P48729 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.05■□□□□ 0
CSNK1A1P48729 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.05■□□□□ 0
CSNK1A1P48729 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.05■□□□□ 0
CSNK1A1P48729 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.05■□□□□ 0
CSNK1A1P48729 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CSNK1A1P48729 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CSNK1A1P48729 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CSNK1A1P48729 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.05■□□□□ -0
CSNK1A1P48729 AC093909.1-201ENST00000504731 1122 ntBASIC15.05■□□□□ -0
CSNK1A1P48729 AL662844.1-201ENST00000546340 181 ntBASIC15.05■□□□□ -0
CSNK1A1P48729 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.05■□□□□ -0
CSNK1A1P48729 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.05■□□□□ -0
CSNK1A1P48729 AC012640.2-201ENST00000561606 901 ntBASIC15.05■□□□□ -0
CSNK1A1P48729 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CSNK1A1P48729 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.05■□□□□ -0
CSNK1A1P48729 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.05■□□□□ -0
CSNK1A1P48729 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.05■□□□□ -0
CSNK1A1P48729 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.05■□□□□ -0
CSNK1A1P48729 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.05■□□□□ -0
CSNK1A1P48729 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.05■□□□□ -0
CSNK1A1P48729 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.05■□□□□ -0
CSNK1A1P48729 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CSNK1A1P48729 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.05■□□□□ -0
CSNK1A1P48729 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.05■□□□□ -0
CSNK1A1P48729 AP002414.3-201ENST00000589352 1468 ntBASIC15.05■□□□□ -0
CSNK1A1P48729 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.05■□□□□ -0
CSNK1A1P48729 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CSNK1A1P48729 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.05■□□□□ -0
CSNK1A1P48729 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.05■□□□□ -0
CSNK1A1P48729 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
CSNK1A1P48729 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.05■□□□□ -0
CSNK1A1P48729 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CSNK1A1P48729 AC011676.5-201ENST00000624864 2660 ntBASIC15.05■□□□□ -0
CSNK1A1P48729 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CSNK1A1P48729 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.04■□□□□ -0
CSNK1A1P48729 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.04■□□□□ -0
CSNK1A1P48729 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
CSNK1A1P48729 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CSNK1A1P48729 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.04■□□□□ -0
CSNK1A1P48729 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CSNK1A1P48729 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
CSNK1A1P48729 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSNK1A1P48729 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSNK1A1P48729 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CSNK1A1P48729 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSNK1A1P48729 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.04■□□□□ -0
CSNK1A1P48729 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.04■□□□□ -0
CSNK1A1P48729 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.04■□□□□ -0
CSNK1A1P48729 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CSNK1A1P48729 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.04■□□□□ -0
CSNK1A1P48729 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.04■□□□□ -0
CSNK1A1P48729 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.04■□□□□ -0
CSNK1A1P48729 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CSNK1A1P48729 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSNK1A1P48729 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.04■□□□□ -0
CSNK1A1P48729 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSNK1A1P48729 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.04■□□□□ -0
CSNK1A1P48729 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.04■□□□□ -0
CSNK1A1P48729 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
CSNK1A1P48729 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.04■□□□□ -0
CSNK1A1P48729 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms