Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HMGCLP35914 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HMGCLP35914 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
HMGCLP35914 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.79■□□□□ 0.28
HMGCLP35914 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGCLP35914 HLA-J-202ENST00000469281 1241 ntBASIC16.79■□□□□ 0.28
HMGCLP35914 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGCLP35914 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGCLP35914 KRT18P58-201ENST00000527480 1120 ntBASIC16.79■□□□□ 0.28
HMGCLP35914 AL031432.2-201ENST00000566714 459 ntBASIC16.79■□□□□ 0.28
HMGCLP35914 AL928711.1-201ENST00000570165 459 ntBASIC16.79■□□□□ 0.28
HMGCLP35914 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
HMGCLP35914 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.79■□□□□ 0.28
HMGCLP35914 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGCLP35914 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HMGCLP35914 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGCLP35914 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
HMGCLP35914 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
HMGCLP35914 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 SNX33P1-201ENST00000592116 1762 ntBASIC16.79■□□□□ 0.28
HMGCLP35914 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
HMGCLP35914 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGCLP35914 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGCLP35914 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCLP35914 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCLP35914 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HMGCLP35914 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGCLP35914 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCLP35914 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.78■□□□□ 0.28
HMGCLP35914 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCLP35914 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGCLP35914 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGCLP35914 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCLP35914 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCLP35914 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCLP35914 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCLP35914 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCLP35914 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
HMGCLP35914 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HMGCLP35914 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCLP35914 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HMGCLP35914 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.78■□□□□ 0.28
HMGCLP35914 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCLP35914 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HMGCLP35914 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGCLP35914 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.78■□□□□ 0.28
HMGCLP35914 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HMGCLP35914 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.78■□□□□ 0.28
HMGCLP35914 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCLP35914 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCLP35914 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGCLP35914 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCLP35914 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
HMGCLP35914 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.78■□□□□ 0.28
HMGCLP35914 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCLP35914 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCLP35914 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCLP35914 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCLP35914 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.77■□□□□ 0.28
HMGCLP35914 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCLP35914 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.77■□□□□ 0.28
HMGCLP35914 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCLP35914 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCLP35914 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCLP35914 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCLP35914 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCLP35914 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
HMGCLP35914 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HMGCLP35914 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.77■□□□□ 0.28
HMGCLP35914 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.77■□□□□ 0.28
HMGCLP35914 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HMGCLP35914 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCLP35914 AC018845.2-201ENST00000568326 409 ntBASIC16.77■□□□□ 0.28
HMGCLP35914 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.77■□□□□ 0.28
HMGCLP35914 AC004877.2-201ENST00000623941 599 ntBASIC16.77■□□□□ 0.28
HMGCLP35914 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.77■□□□□ 0.28
HMGCLP35914 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCLP35914 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCLP35914 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCLP35914 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.77■□□□□ 0.27
HMGCLP35914 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.77■□□□□ 0.27
HMGCLP35914 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMGCLP35914 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMGCLP35914 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms