Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.02■□□□□ -0
HOXC12P31275 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.02■□□□□ -0
HOXC12P31275 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
HOXC12P31275 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
HOXC12P31275 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HOXC12P31275 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.02■□□□□ -0
HOXC12P31275 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.02■□□□□ -0
HOXC12P31275 CRYGEP-201ENST00000412192 528 ntBASIC15.02■□□□□ -0
HOXC12P31275 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.02■□□□□ -0
HOXC12P31275 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
HOXC12P31275 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.02■□□□□ -0
HOXC12P31275 AC108073.2-201ENST00000464002 357 ntBASIC15.02■□□□□ -0
HOXC12P31275 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.02■□□□□ -0
HOXC12P31275 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.02■□□□□ -0
HOXC12P31275 IGHV3-65-201ENST00000523210 341 ntBASIC15.02■□□□□ -0
HOXC12P31275 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.02■□□□□ -0
HOXC12P31275 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.02■□□□□ -0
HOXC12P31275 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.02■□□□□ -0
HOXC12P31275 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HOXC12P31275 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HOXC12P31275 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
HOXC12P31275 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
HOXC12P31275 AC093525.9-201ENST00000624961 1746 ntBASIC15.02□□□□□ -0.01
HOXC12P31275 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
HOXC12P31275 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HOXC12P31275 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
HOXC12P31275 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HOXC12P31275 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HOXC12P31275 AL139384.1-201ENST00000612143 3047 ntBASIC15.02□□□□□ -0.01
HOXC12P31275 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
HOXC12P31275 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
HOXC12P31275 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HOXC12P31275 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
HOXC12P31275 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.02□□□□□ -0.01
HOXC12P31275 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.01□□□□□ -0.01
HOXC12P31275 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
HOXC12P31275 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.01□□□□□ -0.01
HOXC12P31275 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HOXC12P31275 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HOXC12P31275 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.01□□□□□ -0.01
HOXC12P31275 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.01□□□□□ -0.01
HOXC12P31275 AC126755.1-201ENST00000525846 6405 ntBASIC15.01□□□□□ -0.01
HOXC12P31275 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
HOXC12P31275 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.01□□□□□ -0.01
HOXC12P31275 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.01□□□□□ -0.01
HOXC12P31275 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.01□□□□□ -0.01
HOXC12P31275 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.01□□□□□ -0.01
HOXC12P31275 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 AP002472.1-201ENST00000577490 586 ntBASIC15.01□□□□□ -0.01
HOXC12P31275 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HOXC12P31275 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HOXC12P31275 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.01□□□□□ -0.01
HOXC12P31275 AC010654.1-201ENST00000615722 808 ntBASIC15.01□□□□□ -0.01
HOXC12P31275 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.01□□□□□ -0.01
HOXC12P31275 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HOXC12P31275 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HOXC12P31275 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HOXC12P31275 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
HOXC12P31275 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC12P31275 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC12P31275 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HOXC12P31275 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC12P31275 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HOXC12P31275 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC12P31275 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC12P31275 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC12P31275 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HOXC12P31275 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15□□□□□ -0.01
HOXC12P31275 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC12P31275 EGFEM1P-202ENST00000431685 1563 ntBASIC15□□□□□ -0.01
HOXC12P31275 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC12P31275 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15□□□□□ -0.01
HOXC12P31275 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC12P31275 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15□□□□□ -0.01
HOXC12P31275 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15□□□□□ -0.01
HOXC12P31275 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15□□□□□ -0.01
HOXC12P31275 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15□□□□□ -0.01
HOXC12P31275 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15□□□□□ -0.01
HOXC12P31275 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HOXC12P31275 CNN2P11-201ENST00000429351 262 ntBASIC15□□□□□ -0.01
HOXC12P31275 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HOXC12P31275 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15□□□□□ -0.01
HOXC12P31275 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HOXC12P31275 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15□□□□□ -0.01
HOXC12P31275 C20orf181-201ENST00000623918 480 ntBASIC15□□□□□ -0.01
HOXC12P31275 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms