Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
GDF1P27539 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.31■□□□□ 0.04
GDF1P27539 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
GDF1P27539 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
GDF1P27539 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GDF1P27539 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GDF1P27539 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 TUBB8P12-201ENST00000308911 1335 ntBASIC15.3■□□□□ 0.04
GDF1P27539 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GDF1P27539 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
GDF1P27539 TUBB7P-202ENST00000428444 1305 ntBASIC15.3■□□□□ 0.04
GDF1P27539 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.3■□□□□ 0.04
GDF1P27539 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.3■□□□□ 0.04
GDF1P27539 AP006288.1-201ENST00000446065 395 ntBASIC15.3■□□□□ 0.04
GDF1P27539 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.3■□□□□ 0.04
GDF1P27539 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
GDF1P27539 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
GDF1P27539 TUBB8P7-204ENST00000567960 1332 ntBASIC15.3■□□□□ 0.04
GDF1P27539 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
GDF1P27539 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.3■□□□□ 0.04
GDF1P27539 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GDF1P27539 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
GDF1P27539 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.3■□□□□ 0.04
GDF1P27539 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.3■□□□□ 0.04
GDF1P27539 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
GDF1P27539 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
GDF1P27539 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GDF1P27539 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GDF1P27539 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GDF1P27539 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.29■□□□□ 0.04
GDF1P27539 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.29■□□□□ 0.04
GDF1P27539 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GDF1P27539 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GDF1P27539 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.29■□□□□ 0.04
GDF1P27539 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.29■□□□□ 0.04
GDF1P27539 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.29■□□□□ 0.04
GDF1P27539 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GDF1P27539 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GDF1P27539 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.29■□□□□ 0.04
GDF1P27539 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.29■□□□□ 0.04
GDF1P27539 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 HMGA1P7-201ENST00000406908 502 ntBASIC15.29■□□□□ 0.04
GDF1P27539 AC140658.5-201ENST00000438532 169 ntBASIC15.29■□□□□ 0.04
GDF1P27539 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.29■□□□□ 0.04
GDF1P27539 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.29■□□□□ 0.04
GDF1P27539 DUX4L17-201ENST00000557360 1267 ntBASIC15.29■□□□□ 0.04
GDF1P27539 AC087641.1-201ENST00000557561 1021 ntBASIC15.29■□□□□ 0.04
GDF1P27539 AP001160.2-201ENST00000596071 487 ntBASIC15.29■□□□□ 0.04
GDF1P27539 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.29■□□□□ 0.04
GDF1P27539 AC092902.6-201ENST00000641783 218 ntBASIC15.29■□□□□ 0.04
GDF1P27539 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GDF1P27539 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
GDF1P27539 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.29■□□□□ 0.04
GDF1P27539 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms