Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.54■□□□□ 0.72
ERCC3P19447 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.54■□□□□ 0.72
ERCC3P19447 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC3P19447 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC3P19447 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.54■□□□□ 0.72
ERCC3P19447 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.54■□□□□ 0.72
ERCC3P19447 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC3P19447 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC3P19447 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.54■□□□□ 0.72
ERCC3P19447 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC3P19447 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
ERCC3P19447 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ERCC3P19447 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.54■□□□□ 0.72
ERCC3P19447 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC3P19447 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.54■□□□□ 0.72
ERCC3P19447 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.54■□□□□ 0.72
ERCC3P19447 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC3P19447 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC3P19447 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.53■□□□□ 0.72
ERCC3P19447 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
ERCC3P19447 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 AC108860.2-201ENST00000562760 2183 ntBASIC19.53■□□□□ 0.72
ERCC3P19447 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.53■□□□□ 0.72
ERCC3P19447 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.53■□□□□ 0.72
ERCC3P19447 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.53■□□□□ 0.72
ERCC3P19447 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 TFAMP1-201ENST00000412727 736 ntBASIC19.53■□□□□ 0.72
ERCC3P19447 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.53■□□□□ 0.72
ERCC3P19447 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.53■□□□□ 0.72
ERCC3P19447 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.53■□□□□ 0.72
ERCC3P19447 AC243562.1-201ENST00000560672 389 ntBASIC19.53■□□□□ 0.72
ERCC3P19447 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.53■□□□□ 0.72
ERCC3P19447 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.53■□□□□ 0.72
ERCC3P19447 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ERCC3P19447 Z92544.3-201ENST00000624747 417 ntBASIC19.53■□□□□ 0.72
ERCC3P19447 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.53■□□□□ 0.72
ERCC3P19447 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 AL645608.8-201ENST00000606034 2086 ntBASIC19.53■□□□□ 0.72
ERCC3P19447 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC3P19447 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
ERCC3P19447 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC3P19447 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC3P19447 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
ERCC3P19447 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
ERCC3P19447 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC3P19447 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC3P19447 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.52■□□□□ 0.72
ERCC3P19447 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC3P19447 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC3P19447 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC3P19447 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC3P19447 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.52■□□□□ 0.72
ERCC3P19447 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.52■□□□□ 0.72
ERCC3P19447 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.52■□□□□ 0.72
ERCC3P19447 AC015911.4-201ENST00000588022 1070 ntBASIC19.52■□□□□ 0.72
ERCC3P19447 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.52■□□□□ 0.72
ERCC3P19447 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
ERCC3P19447 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
ERCC3P19447 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC3P19447 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC3P19447 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ERCC3P19447 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.52■□□□□ 0.71
ERCC3P19447 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ERCC3P19447 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.51■□□□□ 0.71
ERCC3P19447 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.51■□□□□ 0.71
ERCC3P19447 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ERCC3P19447 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
ERCC3P19447 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 HMGA1P7-201ENST00000406908 502 ntBASIC19.51■□□□□ 0.71
ERCC3P19447 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC3P19447 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.51■□□□□ 0.71
ERCC3P19447 RN7SL589P-201ENST00000481268 310 ntBASIC19.51■□□□□ 0.71
ERCC3P19447 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.51■□□□□ 0.71
ERCC3P19447 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
ERCC3P19447 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.51■□□□□ 0.71
ERCC3P19447 AL135744.1-201ENST00000565098 629 ntBASIC19.51■□□□□ 0.71
ERCC3P19447 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.51■□□□□ 0.71
ERCC3P19447 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.51■□□□□ 0.71
ERCC3P19447 AL390955.2-201ENST00000603032 514 ntBASIC19.51■□□□□ 0.71
ERCC3P19447 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms