Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.14■□□□□ 0.49
CD58P19256 AC010654.1-201ENST00000615722 808 ntBASIC18.14■□□□□ 0.49
CD58P19256 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CD58P19256 TUBB8P12-201ENST00000308911 1335 ntBASIC18.14■□□□□ 0.49
CD58P19256 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CD58P19256 TUBB7P-202ENST00000428444 1305 ntBASIC18.14■□□□□ 0.49
CD58P19256 TUBB8P7-204ENST00000567960 1332 ntBASIC18.14■□□□□ 0.49
CD58P19256 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CD58P19256 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD58P19256 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD58P19256 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.14■□□□□ 0.49
CD58P19256 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CD58P19256 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CD58P19256 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
CD58P19256 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CD58P19256 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD58P19256 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.14■□□□□ 0.49
CD58P19256 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CD58P19256 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.13■□□□□ 0.49
CD58P19256 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CD58P19256 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.13■□□□□ 0.49
CD58P19256 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CD58P19256 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.13■□□□□ 0.49
CD58P19256 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 CRYGEP-201ENST00000412192 528 ntBASIC18.13■□□□□ 0.49
CD58P19256 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.13■□□□□ 0.49
CD58P19256 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.13■□□□□ 0.49
CD58P19256 AC107918.2-201ENST00000530817 355 ntBASIC18.13■□□□□ 0.49
CD58P19256 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.13■□□□□ 0.49
CD58P19256 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CD58P19256 REXO1L3P-201ENST00000622202 1288 ntBASIC18.13■□□□□ 0.49
CD58P19256 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.13■□□□□ 0.49
CD58P19256 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.13■□□□□ 0.49
CD58P19256 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CD58P19256 KRT8P49-201ENST00000604166 1432 ntBASIC18.13■□□□□ 0.49
CD58P19256 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.13■□□□□ 0.49
CD58P19256 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CD58P19256 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.13■□□□□ 0.49
CD58P19256 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.13■□□□□ 0.49
CD58P19256 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CD58P19256 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.12■□□□□ 0.49
CD58P19256 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.12■□□□□ 0.49
CD58P19256 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CD58P19256 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CD58P19256 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.12■□□□□ 0.49
CD58P19256 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.12■□□□□ 0.49
CD58P19256 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CD58P19256 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CD58P19256 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CD58P19256 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CD58P19256 AL022342.1-201ENST00000400363 863 ntBASIC18.12■□□□□ 0.49
CD58P19256 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.12■□□□□ 0.49
CD58P19256 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.12■□□□□ 0.49
CD58P19256 VN2R19P-201ENST00000442399 1052 ntBASIC18.12■□□□□ 0.49
CD58P19256 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.12■□□□□ 0.49
CD58P19256 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.12■□□□□ 0.49
CD58P19256 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 ZNF259P1-201ENST00000407656 1365 ntBASIC18.12■□□□□ 0.49
CD58P19256 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CD58P19256 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CD58P19256 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.12■□□□□ 0.49
CD58P19256 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD58P19256 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CD58P19256 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
CD58P19256 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD58P19256 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD58P19256 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD58P19256 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms