Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
COL11A1P12107 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.94■□□□□ 0.62
COL11A1P12107 AL031731.1-201ENST00000642131 2094 ntBASIC18.94■□□□□ 0.62
COL11A1P12107 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
COL11A1P12107 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL11A1P12107 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL11A1P12107 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL11A1P12107 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.94■□□□□ 0.62
COL11A1P12107 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 AL645728.1-201ENST00000366221 2101 ntBASIC18.93■□□□□ 0.62
COL11A1P12107 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.93■□□□□ 0.62
COL11A1P12107 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.93■□□□□ 0.62
COL11A1P12107 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.93■□□□□ 0.62
COL11A1P12107 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.93■□□□□ 0.62
COL11A1P12107 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.93■□□□□ 0.62
COL11A1P12107 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.93■□□□□ 0.62
COL11A1P12107 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.93■□□□□ 0.62
COL11A1P12107 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.93■□□□□ 0.62
COL11A1P12107 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
COL11A1P12107 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL11A1P12107 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL11A1P12107 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COL11A1P12107 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.93■□□□□ 0.62
COL11A1P12107 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.93■□□□□ 0.62
COL11A1P12107 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.93■□□□□ 0.62
COL11A1P12107 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.93■□□□□ 0.62
COL11A1P12107 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.93■□□□□ 0.62
COL11A1P12107 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 IGHV3-72-202ENST00000621503 303 ntBASIC18.93■□□□□ 0.62
COL11A1P12107 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.93■□□□□ 0.62
COL11A1P12107 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL11A1P12107 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
COL11A1P12107 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL11A1P12107 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL11A1P12107 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL11A1P12107 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL11A1P12107 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL11A1P12107 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
COL11A1P12107 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.92■□□□□ 0.62
COL11A1P12107 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.92■□□□□ 0.62
COL11A1P12107 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
COL11A1P12107 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL11A1P12107 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.92■□□□□ 0.62
COL11A1P12107 AC005034.1-201ENST00000426657 489 ntBASIC18.92■□□□□ 0.62
COL11A1P12107 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.92■□□□□ 0.62
COL11A1P12107 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.92■□□□□ 0.62
COL11A1P12107 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.92■□□□□ 0.62
COL11A1P12107 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.92■□□□□ 0.62
COL11A1P12107 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.92■□□□□ 0.62
COL11A1P12107 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.92■□□□□ 0.62
COL11A1P12107 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.92■□□□□ 0.62
COL11A1P12107 RN7SL828P-201ENST00000607615 303 ntBASIC18.92■□□□□ 0.62
COL11A1P12107 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.92■□□□□ 0.62
COL11A1P12107 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.92■□□□□ 0.62
COL11A1P12107 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.92■□□□□ 0.62
COL11A1P12107 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.92■□□□□ 0.62
COL11A1P12107 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL11A1P12107 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL11A1P12107 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL11A1P12107 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.92■□□□□ 0.62
COL11A1P12107 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.92■□□□□ 0.62
COL11A1P12107 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL11A1P12107 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL11A1P12107 AL603756.1-201ENST00000606511 2163 ntBASIC18.91■□□□□ 0.62
COL11A1P12107 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL11A1P12107 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL11A1P12107 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL11A1P12107 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.91■□□□□ 0.62
COL11A1P12107 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL11A1P12107 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.91■□□□□ 0.62
COL11A1P12107 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.91■□□□□ 0.62
COL11A1P12107 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
COL11A1P12107 AL139011.1-202ENST00000642063 584 ntBASIC18.91■□□□□ 0.62
COL11A1P12107 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL11A1P12107 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
COL11A1P12107 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL11A1P12107 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL11A1P12107 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
COL11A1P12107 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.91■□□□□ 0.62
COL11A1P12107 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL11A1P12107 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL11A1P12107 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL11A1P12107 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.91■□□□□ 0.62
COL11A1P12107 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms