Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EPB41P11171 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.56■□□□□ 0.56
EPB41P11171 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EPB41P11171 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
EPB41P11171 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EPB41P11171 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.56■□□□□ 0.56
EPB41P11171 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
EPB41P11171 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EPB41P11171 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
EPB41P11171 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EPB41P11171 PTCHD3P3-201ENST00000403073 906 ntBASIC18.56■□□□□ 0.56
EPB41P11171 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.56■□□□□ 0.56
EPB41P11171 RPS2P1-201ENST00000434010 821 ntBASIC18.56■□□□□ 0.56
EPB41P11171 PAWRP1-201ENST00000451083 565 ntBASIC18.56■□□□□ 0.56
EPB41P11171 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
EPB41P11171 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.56■□□□□ 0.56
EPB41P11171 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.56■□□□□ 0.56
EPB41P11171 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
EPB41P11171 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.56■□□□□ 0.56
EPB41P11171 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EPB41P11171 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EPB41P11171 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
EPB41P11171 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.56■□□□□ 0.56
EPB41P11171 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
EPB41P11171 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.56■□□□□ 0.56
EPB41P11171 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EPB41P11171 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.56■□□□□ 0.56
EPB41P11171 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.56■□□□□ 0.56
EPB41P11171 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
EPB41P11171 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EPB41P11171 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
EPB41P11171 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
EPB41P11171 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.56■□□□□ 0.56
EPB41P11171 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.56■□□□□ 0.56
EPB41P11171 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
EPB41P11171 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 AL645728.1-201ENST00000366221 2101 ntBASIC18.55■□□□□ 0.56
EPB41P11171 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.55■□□□□ 0.56
EPB41P11171 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
EPB41P11171 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
EPB41P11171 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.55■□□□□ 0.56
EPB41P11171 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.55■□□□□ 0.56
EPB41P11171 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
EPB41P11171 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.55■□□□□ 0.56
EPB41P11171 OR7E14P-202ENST00000530490 1290 ntBASIC18.55■□□□□ 0.56
EPB41P11171 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.55■□□□□ 0.56
EPB41P11171 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.55■□□□□ 0.56
EPB41P11171 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.55■□□□□ 0.56
EPB41P11171 AL121912.1-201ENST00000603683 238 ntBASIC18.55■□□□□ 0.56
EPB41P11171 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.55■□□□□ 0.56
EPB41P11171 TP73-AS1-207ENST00000624167 988 ntBASIC18.55■□□□□ 0.56
EPB41P11171 AL805961.1-202ENST00000641562 540 ntBASIC18.55■□□□□ 0.56
EPB41P11171 AF228730.7-201ENST00000641842 219 ntBASIC18.55■□□□□ 0.56
EPB41P11171 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
EPB41P11171 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.55■□□□□ 0.56
EPB41P11171 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
EPB41P11171 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
EPB41P11171 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
EPB41P11171 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
EPB41P11171 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPB41P11171 PCDHA14-201ENST00000506751 2298 ntBASIC18.54■□□□□ 0.56
EPB41P11171 PI4KAP1-204ENST00000612579 1703 ntBASIC18.54■□□□□ 0.56
EPB41P11171 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
EPB41P11171 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EPB41P11171 DOC2GP-204ENST00000639052 2548 ntBASIC18.54■□□□□ 0.56
EPB41P11171 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EPB41P11171 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
EPB41P11171 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EPB41P11171 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
EPB41P11171 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
EPB41P11171 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.54■□□□□ 0.56
EPB41P11171 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.54■□□□□ 0.56
EPB41P11171 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EPB41P11171 RNPS1P1-201ENST00000507437 918 ntBASIC18.54■□□□□ 0.56
EPB41P11171 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.54■□□□□ 0.56
EPB41P11171 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms