Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 CRYGEP-201ENST00000412192 528 ntBASIC17.12■□□□□ 0.33
HLA-DQB2P05538 HCG4B-203ENST00000450128 991 ntBASIC17.12■□□□□ 0.33
HLA-DQB2P05538 RPL13AP23-201ENST00000480739 586 ntBASIC17.12■□□□□ 0.33
HLA-DQB2P05538 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 AC005412.3-201ENST00000580309 715 ntBASIC17.12■□□□□ 0.33
HLA-DQB2P05538 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.11■□□□□ 0.33
HLA-DQB2P05538 FAM185BP-201ENST00000443595 716 ntBASIC17.11■□□□□ 0.33
HLA-DQB2P05538 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 CXCL1P1-201ENST00000502804 216 ntBASIC17.11■□□□□ 0.33
HLA-DQB2P05538 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 BX640515.1-201ENST00000617215 977 ntBASIC17.11■□□□□ 0.33
HLA-DQB2P05538 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB2P05538 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 CYP2A7P1-201ENST00000595391 815 ntBASIC17.1■□□□□ 0.33
HLA-DQB2P05538 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 AL671710.1-201ENST00000610245 2349 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms