Protein–RNA interactions for Protein: P05014

IFNA4, Interferon alpha-4, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA4P05014 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA4P05014 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA4P05014 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA4P05014 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA4P05014 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA4P05014 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.02□□□□□ -0.16
IFNA4P05014 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA4P05014 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA4P05014 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA4P05014 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
IFNA4P05014 AL137784.3-201ENST00000623858 2288 ntBASIC14.02□□□□□ -0.16
IFNA4P05014 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.02□□□□□ -0.16
IFNA4P05014 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA4P05014 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA4P05014 AC092068.3-201ENST00000587894 2016 ntBASIC14.02□□□□□ -0.16
IFNA4P05014 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA4P05014 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA4P05014 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.02□□□□□ -0.16
IFNA4P05014 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
IFNA4P05014 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
IFNA4P05014 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.02□□□□□ -0.16
IFNA4P05014 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.02□□□□□ -0.16
IFNA4P05014 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA4P05014 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.02□□□□□ -0.16
IFNA4P05014 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
IFNA4P05014 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
IFNA4P05014 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA4P05014 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
IFNA4P05014 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA4P05014 MMP23A-201ENST00000234610 1017 ntBASIC14.02□□□□□ -0.17
IFNA4P05014 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA4P05014 MIR1224-201ENST00000408193 85 ntBASIC14.02□□□□□ -0.17
IFNA4P05014 HMGA1P5-201ENST00000412453 271 ntBASIC14.02□□□□□ -0.17
IFNA4P05014 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.02□□□□□ -0.17
IFNA4P05014 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.02□□□□□ -0.17
IFNA4P05014 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.02□□□□□ -0.17
IFNA4P05014 KRT18P21-201ENST00000515767 1272 ntBASIC14.02□□□□□ -0.17
IFNA4P05014 AL355075.4-201ENST00000554988 638 ntBASIC14.02□□□□□ -0.17
IFNA4P05014 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA4P05014 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.02□□□□□ -0.17
IFNA4P05014 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA4P05014 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.02□□□□□ -0.17
IFNA4P05014 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.02□□□□□ -0.17
IFNA4P05014 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.02□□□□□ -0.17
IFNA4P05014 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.02□□□□□ -0.17
IFNA4P05014 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
IFNA4P05014 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
IFNA4P05014 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA4P05014 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA4P05014 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA4P05014 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
IFNA4P05014 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
IFNA4P05014 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA4P05014 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA4P05014 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA4P05014 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA4P05014 AC060834.1-201ENST00000443027 2032 ntBASIC14.02□□□□□ -0.17
IFNA4P05014 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.02□□□□□ -0.17
IFNA4P05014 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
IFNA4P05014 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.01□□□□□ -0.17
IFNA4P05014 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.01□□□□□ -0.17
IFNA4P05014 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.01□□□□□ -0.17
IFNA4P05014 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.01□□□□□ -0.17
IFNA4P05014 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
IFNA4P05014 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.01□□□□□ -0.17
IFNA4P05014 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.01□□□□□ -0.17
IFNA4P05014 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.01□□□□□ -0.17
IFNA4P05014 AC087499.1-201ENST00000418141 1075 ntBASIC14.01□□□□□ -0.17
IFNA4P05014 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.01□□□□□ -0.17
IFNA4P05014 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.01□□□□□ -0.17
IFNA4P05014 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.01□□□□□ -0.17
IFNA4P05014 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
IFNA4P05014 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 AC138035.3-201ENST00000622706 2791 ntBASIC14.01□□□□□ -0.17
IFNA4P05014 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
IFNA4P05014 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.01□□□□□ -0.17
IFNA4P05014 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
IFNA4P05014 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA4P05014 AC006058.4-201ENST00000624016 1670 ntBASIC14.01□□□□□ -0.17
IFNA4P05014 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.01□□□□□ -0.17
IFNA4P05014 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
IFNA4P05014 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms