Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CD74P04233 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 AC003669.1-201ENST00000334569 611 ntBASIC14.24□□□□□ -0.13
CD74P04233 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.24□□□□□ -0.13
CD74P04233 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.24□□□□□ -0.13
CD74P04233 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.24□□□□□ -0.13
CD74P04233 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CD74P04233 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.24□□□□□ -0.13
CD74P04233 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CD74P04233 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.24□□□□□ -0.13
CD74P04233 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CD74P04233 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.24□□□□□ -0.13
CD74P04233 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.24□□□□□ -0.13
CD74P04233 AC013467.2-201ENST00000605472 835 ntBASIC14.24□□□□□ -0.13
CD74P04233 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.24□□□□□ -0.13
CD74P04233 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CD74P04233 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.24□□□□□ -0.13
CD74P04233 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CD74P04233 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.24□□□□□ -0.13
CD74P04233 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CD74P04233 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
CD74P04233 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.24□□□□□ -0.13
CD74P04233 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CD74P04233 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.24□□□□□ -0.13
CD74P04233 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 DBET-201ENST00000630918 3363 ntBASIC14.23□□□□□ -0.13
CD74P04233 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.23□□□□□ -0.13
CD74P04233 AP005117.1-202ENST00000581724 1908 ntBASIC14.23□□□□□ -0.13
CD74P04233 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.23□□□□□ -0.13
CD74P04233 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CD74P04233 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CD74P04233 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.23□□□□□ -0.13
CD74P04233 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CD74P04233 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 MIR718-201ENST00000390190 70 ntBASIC14.23□□□□□ -0.13
CD74P04233 STARP1-201ENST00000397973 869 ntBASIC14.23□□□□□ -0.13
CD74P04233 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.23□□□□□ -0.13
CD74P04233 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CD74P04233 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CD74P04233 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.23□□□□□ -0.13
CD74P04233 AL138831.2-201ENST00000606564 490 ntBASIC14.23□□□□□ -0.13
CD74P04233 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.23□□□□□ -0.13
CD74P04233 AC006449.6-201ENST00000612330 2296 ntBASIC14.23□□□□□ -0.13
CD74P04233 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CD74P04233 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CD74P04233 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CD74P04233 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CD74P04233 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CD74P04233 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CD74P04233 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD74P04233 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CD74P04233 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CD74P04233 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CD74P04233 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
CD74P04233 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms