Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
APOBP04114 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 AP000974.1-201ENST00000623909 2387 ntBASIC10.35□□□□□ -0.75
APOBP04114 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
APOBP04114 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
APOBP04114 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOBP04114 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC10.35□□□□□ -0.75
APOBP04114 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
APOBP04114 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
APOBP04114 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
APOBP04114 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOBP04114 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.34□□□□□ -0.75
APOBP04114 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC10.34□□□□□ -0.75
APOBP04114 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
APOBP04114 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC10.34□□□□□ -0.75
APOBP04114 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC10.34□□□□□ -0.75
APOBP04114 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOBP04114 AC098818.2-201ENST00000564925 2320 ntBASIC10.34□□□□□ -0.75
APOBP04114 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC10.34□□□□□ -0.75
APOBP04114 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOBP04114 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC10.34□□□□□ -0.75
APOBP04114 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOBP04114 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
APOBP04114 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC10.34□□□□□ -0.75
APOBP04114 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.34□□□□□ -0.75
APOBP04114 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOBP04114 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC10.34□□□□□ -0.75
APOBP04114 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
APOBP04114 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOBP04114 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
APOBP04114 MIR1247-201ENST00000408206 136 ntBASIC10.34□□□□□ -0.75
APOBP04114 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC10.34□□□□□ -0.75
APOBP04114 OLR1-203ENST00000432556 950 ntTSL 2 BASIC10.34□□□□□ -0.75
APOBP04114 STARD13-205ENST00000439831 945 ntTSL 2 BASIC10.34□□□□□ -0.75
APOBP04114 MAX-210ENST00000555419 765 ntTSL 5 BASIC10.34□□□□□ -0.75
APOBP04114 QPRT-203ENST00000562473 579 ntTSL 3 BASIC10.34□□□□□ -0.75
APOBP04114 AC020765.3-201ENST00000613051 740 ntBASIC10.34□□□□□ -0.75
APOBP04114 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
APOBP04114 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC10.34□□□□□ -0.75
APOBP04114 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
APOBP04114 AMT-232ENST00000636199 1546 ntTSL 5 BASIC10.34□□□□□ -0.75
APOBP04114 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
APOBP04114 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
APOBP04114 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOBP04114 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOBP04114 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC10.34□□□□□ -0.75
APOBP04114 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOBP04114 RN7SL190P-201ENST00000582519 257 ntBASIC10.34□□□□□ -0.75
APOBP04114 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC10.34□□□□□ -0.75
APOBP04114 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC10.34□□□□□ -0.75
APOBP04114 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 AC092506.1-202ENST00000401022 528 ntBASIC10.33□□□□□ -0.76
APOBP04114 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC10.33□□□□□ -0.76
APOBP04114 FTH1P14-201ENST00000482930 551 ntBASIC10.33□□□□□ -0.76
APOBP04114 AC098859.1-201ENST00000502915 1238 ntBASIC10.33□□□□□ -0.76
APOBP04114 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 SLC25A47P1-201ENST00000531577 414 ntBASIC10.33□□□□□ -0.76
APOBP04114 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
APOBP04114 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC10.33□□□□□ -0.76
APOBP04114 TOP3BP1-201ENST00000420768 1380 ntBASIC10.33□□□□□ -0.76
APOBP04114 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC10.33□□□□□ -0.76
APOBP04114 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC10.33□□□□□ -0.76
APOBP04114 FOS-206ENST00000555347 1280 ntTSL 2 BASIC10.33□□□□□ -0.76
APOBP04114 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
APOBP04114 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
APOBP04114 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC10.33□□□□□ -0.76
APOBP04114 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC10.33□□□□□ -0.76
APOBP04114 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC10.33□□□□□ -0.76
APOBP04114 AC233724.13-201ENST00000598383 410 ntBASIC10.33□□□□□ -0.76
APOBP04114 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC10.33□□□□□ -0.76
APOBP04114 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC10.33□□□□□ -0.76
APOBP04114 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC10.33□□□□□ -0.76
APOBP04114 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC10.33□□□□□ -0.76
APOBP04114 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC10.33□□□□□ -0.76
APOBP04114 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
APOBP04114 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
APOBP04114 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
APOBP04114 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms