Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.01□□□□□ -0.01
APOC1P02654 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.01□□□□□ -0.01
APOC1P02654 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
APOC1P02654 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
APOC1P02654 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC1P02654 ABCD1P5-201ENST00000445663 754 ntBASIC15.01□□□□□ -0.01
APOC1P02654 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.01□□□□□ -0.01
APOC1P02654 MIR3180-1-201ENST00000580374 94 ntBASIC15.01□□□□□ -0.01
APOC1P02654 MIR3180-3-201ENST00000584616 94 ntBASIC15.01□□□□□ -0.01
APOC1P02654 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.01□□□□□ -0.01
APOC1P02654 AC099336.1-202ENST00000602961 463 ntBASIC15.01□□□□□ -0.01
APOC1P02654 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOC1P02654 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.01□□□□□ -0.01
APOC1P02654 PCDHA1-201ENST00000378133 2726 ntBASIC15.01□□□□□ -0.01
APOC1P02654 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
APOC1P02654 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
APOC1P02654 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC1P02654 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC1P02654 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC1P02654 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC1P02654 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.01□□□□□ -0.01
APOC1P02654 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
APOC1P02654 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
APOC1P02654 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOC1P02654 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC1P02654 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC1P02654 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
APOC1P02654 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOC1P02654 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC1P02654 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.01□□□□□ -0.01
APOC1P02654 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.01□□□□□ -0.01
APOC1P02654 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.01□□□□□ -0.01
APOC1P02654 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOC1P02654 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC1P02654 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
APOC1P02654 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15□□□□□ -0.01
APOC1P02654 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15□□□□□ -0.01
APOC1P02654 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15□□□□□ -0.01
APOC1P02654 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15□□□□□ -0.01
APOC1P02654 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15□□□□□ -0.01
APOC1P02654 SPDYE21P-201ENST00000413323 827 ntBASIC15□□□□□ -0.01
APOC1P02654 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15□□□□□ -0.01
APOC1P02654 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15□□□□□ -0.01
APOC1P02654 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15□□□□□ -0.01
APOC1P02654 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15□□□□□ -0.01
APOC1P02654 MIR5100-201ENST00000579544 119 ntBASIC15□□□□□ -0.01
APOC1P02654 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15□□□□□ -0.01
APOC1P02654 AL591684.3-201ENST00000605187 298 ntBASIC15□□□□□ -0.01
APOC1P02654 NPAP1P7-201ENST00000613027 823 ntBASIC15□□□□□ -0.01
APOC1P02654 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15□□□□□ -0.01
APOC1P02654 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 AL358472.4-201ENST00000633140 710 ntBASIC15□□□□□ -0.01
APOC1P02654 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15□□□□□ -0.01
APOC1P02654 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15□□□□□ -0.01
APOC1P02654 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
APOC1P02654 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15□□□□□ -0.01
APOC1P02654 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15□□□□□ -0.01
APOC1P02654 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
APOC1P02654 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC1P02654 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15□□□□□ -0.01
APOC1P02654 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
APOC1P02654 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.99□□□□□ -0.01
APOC1P02654 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.99□□□□□ -0.01
APOC1P02654 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.99□□□□□ -0.01
APOC1P02654 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
APOC1P02654 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
APOC1P02654 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms