Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX2-2O95096 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX2-2O95096 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NKX2-2O95096 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX2-2O95096 HCG4-201ENST00000418983 998 ntBASIC15.58■□□□□ 0.08
NKX2-2O95096 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.58■□□□□ 0.08
NKX2-2O95096 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NKX2-2O95096 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.58■□□□□ 0.08
NKX2-2O95096 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.58■□□□□ 0.08
NKX2-2O95096 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.58■□□□□ 0.08
NKX2-2O95096 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.58■□□□□ 0.08
NKX2-2O95096 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.58■□□□□ 0.08
NKX2-2O95096 MIR4751-201ENST00000578027 74 ntBASIC15.58■□□□□ 0.08
NKX2-2O95096 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.58■□□□□ 0.08
NKX2-2O95096 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX2-2O95096 CYP2A7P1-201ENST00000595391 815 ntBASIC15.58■□□□□ 0.08
NKX2-2O95096 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.58■□□□□ 0.08
NKX2-2O95096 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NKX2-2O95096 AL118508.1-201ENST00000613502 2345 ntBASIC15.58■□□□□ 0.08
NKX2-2O95096 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX2-2O95096 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX2-2O95096 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
NKX2-2O95096 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.58■□□□□ 0.08
NKX2-2O95096 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX2-2O95096 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX2-2O95096 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX2-2O95096 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX2-2O95096 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
NKX2-2O95096 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
NKX2-2O95096 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NKX2-2O95096 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NKX2-2O95096 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
NKX2-2O95096 VN2R19P-201ENST00000442399 1052 ntBASIC15.57■□□□□ 0.08
NKX2-2O95096 FDX1P1-201ENST00000449115 551 ntBASIC15.57■□□□□ 0.08
NKX2-2O95096 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NKX2-2O95096 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.57■□□□□ 0.08
NKX2-2O95096 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.57■□□□□ 0.08
NKX2-2O95096 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 AC087641.1-201ENST00000557561 1021 ntBASIC15.57■□□□□ 0.08
NKX2-2O95096 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NKX2-2O95096 ACTL9-202ENST00000612068 1252 ntBASIC15.57■□□□□ 0.08
NKX2-2O95096 AP001350.2-201ENST00000625104 1094 ntBASIC15.57■□□□□ 0.08
NKX2-2O95096 KRT8P39-201ENST00000396270 1433 ntBASIC15.57■□□□□ 0.08
NKX2-2O95096 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.57■□□□□ 0.08
NKX2-2O95096 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.57■□□□□ 0.08
NKX2-2O95096 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX2-2O95096 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
NKX2-2O95096 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NKX2-2O95096 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.56■□□□□ 0.08
NKX2-2O95096 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NKX2-2O95096 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.56■□□□□ 0.08
NKX2-2O95096 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.56■□□□□ 0.08
NKX2-2O95096 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
NKX2-2O95096 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.56■□□□□ 0.08
NKX2-2O95096 CXCL1P1-201ENST00000502804 216 ntBASIC15.56■□□□□ 0.08
NKX2-2O95096 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.56■□□□□ 0.08
NKX2-2O95096 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.56■□□□□ 0.08
NKX2-2O95096 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.56■□□□□ 0.08
NKX2-2O95096 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.56■□□□□ 0.08
NKX2-2O95096 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.56■□□□□ 0.08
NKX2-2O95096 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.56■□□□□ 0.08
NKX2-2O95096 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX2-2O95096 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.56■□□□□ 0.08
NKX2-2O95096 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
NKX2-2O95096 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.56■□□□□ 0.08
NKX2-2O95096 UBALD1-205ENST00000590891 2641 ntBASIC15.56■□□□□ 0.08
NKX2-2O95096 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms