Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.41■□□□□ 0.06
CLPXO76031 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CLPXO76031 AC092338.2-201ENST00000568827 1415 ntBASIC15.41■□□□□ 0.06
CLPXO76031 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.41■□□□□ 0.06
CLPXO76031 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.41■□□□□ 0.06
CLPXO76031 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLPXO76031 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CLPXO76031 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLPXO76031 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLPXO76031 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 LIN28AP1-201ENST00000429574 405 ntBASIC15.4■□□□□ 0.06
CLPXO76031 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.4■□□□□ 0.06
CLPXO76031 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
CLPXO76031 AP003041.3-201ENST00000527151 707 ntBASIC15.4■□□□□ 0.06
CLPXO76031 AC009065.1-201ENST00000564055 1225 ntBASIC15.4■□□□□ 0.06
CLPXO76031 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.4■□□□□ 0.06
CLPXO76031 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CLPXO76031 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CLPXO76031 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.4■□□□□ 0.06
CLPXO76031 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLPXO76031 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLPXO76031 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLPXO76031 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.4■□□□□ 0.06
CLPXO76031 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
CLPXO76031 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.39■□□□□ 0.05
CLPXO76031 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLPXO76031 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.39■□□□□ 0.05
CLPXO76031 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.39■□□□□ 0.05
CLPXO76031 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.39■□□□□ 0.05
CLPXO76031 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLPXO76031 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.39■□□□□ 0.05
CLPXO76031 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLPXO76031 AC005104.2-201ENST00000427818 678 ntBASIC15.39■□□□□ 0.05
CLPXO76031 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.39■□□□□ 0.05
CLPXO76031 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLPXO76031 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CLPXO76031 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.39■□□□□ 0.05
CLPXO76031 MIR4674-201ENST00000582457 87 ntBASIC15.39■□□□□ 0.05
CLPXO76031 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.39■□□□□ 0.05
CLPXO76031 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 AC010653.2-201ENST00000623505 997 ntBASIC15.39■□□□□ 0.05
CLPXO76031 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.39■□□□□ 0.05
CLPXO76031 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.39■□□□□ 0.05
CLPXO76031 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.39■□□□□ 0.05
CLPXO76031 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.39■□□□□ 0.05
CLPXO76031 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLPXO76031 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLPXO76031 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms