Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LGR5O75473 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.68■□□□□ 0.58
LGR5O75473 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LGR5O75473 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.68■□□□□ 0.58
LGR5O75473 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LGR5O75473 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LGR5O75473 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.67■□□□□ 0.58
LGR5O75473 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LGR5O75473 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LGR5O75473 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.67■□□□□ 0.58
LGR5O75473 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.67■□□□□ 0.58
LGR5O75473 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.67■□□□□ 0.58
LGR5O75473 RNA5SP421-201ENST00000516864 134 ntBASIC18.67■□□□□ 0.58
LGR5O75473 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.67■□□□□ 0.58
LGR5O75473 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.67■□□□□ 0.58
LGR5O75473 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.67■□□□□ 0.58
LGR5O75473 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.67■□□□□ 0.58
LGR5O75473 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
LGR5O75473 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 AC020916.1-201ENST00000587762 1774 ntBASIC18.67■□□□□ 0.58
LGR5O75473 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
LGR5O75473 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.67■□□□□ 0.58
LGR5O75473 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 AL023806.1-201ENST00000603994 1649 ntBASIC18.67■□□□□ 0.58
LGR5O75473 AC006277.1-201ENST00000624348 1610 ntBASIC18.67■□□□□ 0.58
LGR5O75473 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LGR5O75473 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGR5O75473 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LGR5O75473 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LGR5O75473 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LGR5O75473 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
LGR5O75473 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGR5O75473 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGR5O75473 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.66■□□□□ 0.58
LGR5O75473 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGR5O75473 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LGR5O75473 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LGR5O75473 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGR5O75473 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
LGR5O75473 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGR5O75473 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.66■□□□□ 0.58
LGR5O75473 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LGR5O75473 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.66■□□□□ 0.58
LGR5O75473 CNN2P2-201ENST00000443536 909 ntBASIC18.66■□□□□ 0.58
LGR5O75473 CNN2P3-201ENST00000450201 906 ntBASIC18.66■□□□□ 0.58
LGR5O75473 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.66■□□□□ 0.58
LGR5O75473 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.66■□□□□ 0.58
LGR5O75473 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.66■□□□□ 0.58
LGR5O75473 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LGR5O75473 AL136317.3-201ENST00000618497 906 ntBASIC18.66■□□□□ 0.58
LGR5O75473 AP001059.3-201ENST00000619053 235 ntBASIC18.66■□□□□ 0.58
LGR5O75473 AJ011932.1-201ENST00000621707 465 ntBASIC18.66■□□□□ 0.58
LGR5O75473 AC008267.7-201ENST00000624570 1194 ntBASIC18.66■□□□□ 0.58
LGR5O75473 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LGR5O75473 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.66■□□□□ 0.58
LGR5O75473 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.66■□□□□ 0.58
LGR5O75473 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LGR5O75473 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.66■□□□□ 0.58
LGR5O75473 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGR5O75473 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGR5O75473 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGR5O75473 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LGR5O75473 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.65■□□□□ 0.58
LGR5O75473 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGR5O75473 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LGR5O75473 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGR5O75473 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.65■□□□□ 0.58
LGR5O75473 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LGR5O75473 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGR5O75473 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGR5O75473 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LGR5O75473 MIR346-201ENST00000362234 95 ntBASIC18.65■□□□□ 0.58
LGR5O75473 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
LGR5O75473 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LGR5O75473 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.65■□□□□ 0.58
LGR5O75473 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
LGR5O75473 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
LGR5O75473 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.65■□□□□ 0.58
LGR5O75473 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGR5O75473 AC093214.1-201ENST00000511688 1107 ntBASIC18.65■□□□□ 0.58
LGR5O75473 IGHV3-62-201ENST00000520057 340 ntBASIC18.65■□□□□ 0.58
LGR5O75473 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGR5O75473 AC069262.1-201ENST00000539058 672 ntBASIC18.65■□□□□ 0.58
LGR5O75473 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.65■□□□□ 0.58
LGR5O75473 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms