Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 AL035633.1-201ENST00000406139 838 ntBASIC16.13■□□□□ 0.17
DUX1O43812 RBPMS2P1-201ENST00000437762 623 ntBASIC16.13■□□□□ 0.17
DUX1O43812 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.13■□□□□ 0.17
DUX1O43812 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.13■□□□□ 0.17
DUX1O43812 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.13■□□□□ 0.17
DUX1O43812 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.13■□□□□ 0.17
DUX1O43812 AP001059.3-201ENST00000619053 235 ntBASIC16.13■□□□□ 0.17
DUX1O43812 AC008267.7-201ENST00000624570 1194 ntBASIC16.13■□□□□ 0.17
DUX1O43812 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 AC016027.1-202ENST00000607927 1699 ntBASIC16.13■□□□□ 0.17
DUX1O43812 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
DUX1O43812 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.13■□□□□ 0.17
DUX1O43812 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
DUX1O43812 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
DUX1O43812 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
DUX1O43812 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 AC068880.1-201ENST00000507289 2297 ntBASIC16.12■□□□□ 0.17
DUX1O43812 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
DUX1O43812 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
DUX1O43812 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.12■□□□□ 0.17
DUX1O43812 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.12■□□□□ 0.17
DUX1O43812 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.12■□□□□ 0.17
DUX1O43812 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.12■□□□□ 0.17
DUX1O43812 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.12■□□□□ 0.17
DUX1O43812 FAM58DP-201ENST00000428076 619 ntBASIC16.12■□□□□ 0.17
DUX1O43812 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.12■□□□□ 0.17
DUX1O43812 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.12■□□□□ 0.17
DUX1O43812 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
DUX1O43812 MIR4492-201ENST00000581627 80 ntBASIC16.12■□□□□ 0.17
DUX1O43812 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.12■□□□□ 0.17
DUX1O43812 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
DUX1O43812 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.12■□□□□ 0.17
DUX1O43812 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.12■□□□□ 0.17
DUX1O43812 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.12■□□□□ 0.17
DUX1O43812 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.12■□□□□ 0.17
DUX1O43812 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.12■□□□□ 0.17
DUX1O43812 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.12■□□□□ 0.17
DUX1O43812 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.12■□□□□ 0.17
DUX1O43812 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX1O43812 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
DUX1O43812 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.12■□□□□ 0.17
DUX1O43812 AC108860.2-201ENST00000562760 2183 ntBASIC16.11■□□□□ 0.17
DUX1O43812 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.11■□□□□ 0.17
DUX1O43812 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
DUX1O43812 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DUX1O43812 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX1O43812 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX1O43812 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DUX1O43812 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX1O43812 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX1O43812 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX1O43812 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX1O43812 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX1O43812 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX1O43812 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX1O43812 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX1O43812 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX1O43812 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
DUX1O43812 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DUX1O43812 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.11■□□□□ 0.17
DUX1O43812 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.11■□□□□ 0.17
DUX1O43812 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.11■□□□□ 0.17
DUX1O43812 BCRP1-201ENST00000444246 691 ntBASIC16.11■□□□□ 0.17
DUX1O43812 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
DUX1O43812 AL512356.2-201ENST00000546955 174 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms