Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CLDN5O00501 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN5O00501 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CLDN5O00501 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN5O00501 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN5O00501 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN5O00501 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN5O00501 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN5O00501 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN5O00501 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN5O00501 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN5O00501 AC105020.1-201ENST00000435356 2205 ntBASIC17.78■□□□□ 0.44
CLDN5O00501 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN5O00501 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN5O00501 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN5O00501 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN5O00501 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN5O00501 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN5O00501 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN5O00501 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN5O00501 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN5O00501 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CLDN5O00501 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN5O00501 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN5O00501 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN5O00501 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN5O00501 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN5O00501 AC211486.1-202ENST00000416371 468 ntBASIC17.77■□□□□ 0.44
CLDN5O00501 AC004967.1-201ENST00000453589 447 ntBASIC17.77■□□□□ 0.44
CLDN5O00501 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.77■□□□□ 0.44
CLDN5O00501 AC211476.1-201ENST00000503899 468 ntBASIC17.77■□□□□ 0.44
CLDN5O00501 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN5O00501 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.77■□□□□ 0.44
CLDN5O00501 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.77■□□□□ 0.44
CLDN5O00501 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN5O00501 AC099522.2-201ENST00000607001 744 ntBASIC17.77■□□□□ 0.44
CLDN5O00501 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN5O00501 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CLDN5O00501 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN5O00501 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN5O00501 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
CLDN5O00501 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN5O00501 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.77■□□□□ 0.43
CLDN5O00501 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN5O00501 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.77■□□□□ 0.43
CLDN5O00501 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN5O00501 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLDN5O00501 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 PKD1P1-201ENST00000458669 6805 ntBASIC17.76■□□□□ 0.43
CLDN5O00501 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLDN5O00501 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 AC006277.1-201ENST00000624348 1610 ntBASIC17.76■□□□□ 0.43
CLDN5O00501 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN5O00501 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN5O00501 RNF216P1-203ENST00000404404 2427 ntBASIC17.76■□□□□ 0.43
CLDN5O00501 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLDN5O00501 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CLDN5O00501 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN5O00501 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
CLDN5O00501 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN5O00501 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN5O00501 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CLDN5O00501 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CLDN5O00501 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN5O00501 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
CLDN5O00501 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN5O00501 AL596442.2-201ENST00000610240 980 ntBASIC17.76■□□□□ 0.43
CLDN5O00501 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
CLDN5O00501 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CLDN5O00501 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CLDN5O00501 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN5O00501 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN5O00501 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN5O00501 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN5O00501 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN5O00501 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CLDN5O00501 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLDN5O00501 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN5O00501 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN5O00501 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN5O00501 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLDN5O00501 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN5O00501 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms