Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC7O00311 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC7O00311 LAGE3P1-201ENST00000425356 484 ntBASIC16.59■□□□□ 0.25
CDC7O00311 AC087163.2-201ENST00000457299 853 ntBASIC16.59■□□□□ 0.25
CDC7O00311 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC7O00311 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.59■□□□□ 0.25
CDC7O00311 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.59■□□□□ 0.25
CDC7O00311 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDC7O00311 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDC7O00311 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.59■□□□□ 0.25
CDC7O00311 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.59■□□□□ 0.25
CDC7O00311 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CDC7O00311 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC7O00311 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC7O00311 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC7O00311 AC002310.6-201ENST00000624451 1377 ntBASIC16.59■□□□□ 0.25
CDC7O00311 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CDC7O00311 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC7O00311 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC7O00311 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC7O00311 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.59■□□□□ 0.25
CDC7O00311 AC006277.1-201ENST00000624348 1610 ntBASIC16.59■□□□□ 0.25
CDC7O00311 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CDC7O00311 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC7O00311 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.59■□□□□ 0.25
CDC7O00311 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.59■□□□□ 0.25
CDC7O00311 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDC7O00311 ALOX12P2-203ENST00000570921 1945 ntBASIC16.58■□□□□ 0.25
CDC7O00311 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDC7O00311 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CDC7O00311 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.58■□□□□ 0.25
CDC7O00311 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CDC7O00311 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDC7O00311 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CDC7O00311 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDC7O00311 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CDC7O00311 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.58■□□□□ 0.24
CDC7O00311 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.58■□□□□ 0.24
CDC7O00311 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.58■□□□□ 0.24
CDC7O00311 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 DUSP5P1-201ENST00000441325 1139 ntBASIC16.58■□□□□ 0.24
CDC7O00311 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.58■□□□□ 0.24
CDC7O00311 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CDC7O00311 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.58■□□□□ 0.24
CDC7O00311 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CDC7O00311 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.58■□□□□ 0.24
CDC7O00311 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CDC7O00311 TP73-AS1-207ENST00000624167 988 ntBASIC16.58■□□□□ 0.24
CDC7O00311 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 TOP3BP1-201ENST00000420768 1380 ntBASIC16.58■□□□□ 0.24
CDC7O00311 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.58■□□□□ 0.24
CDC7O00311 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CDC7O00311 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.58■□□□□ 0.24
CDC7O00311 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CDC7O00311 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC7O00311 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CDC7O00311 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.57■□□□□ 0.24
CDC7O00311 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.57■□□□□ 0.24
CDC7O00311 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDC7O00311 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.57■□□□□ 0.24
CDC7O00311 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.57■□□□□ 0.24
CDC7O00311 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.57■□□□□ 0.24
CDC7O00311 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 SLC25A6P2-201ENST00000497974 877 ntBASIC16.57■□□□□ 0.24
CDC7O00311 RNPS1P1-201ENST00000507437 918 ntBASIC16.57■□□□□ 0.24
CDC7O00311 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 OR7E14P-202ENST00000530490 1290 ntBASIC16.57■□□□□ 0.24
CDC7O00311 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.57■□□□□ 0.24
CDC7O00311 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.57■□□□□ 0.24
CDC7O00311 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.57■□□□□ 0.24
CDC7O00311 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDC7O00311 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.57■□□□□ 0.24
CDC7O00311 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.57■□□□□ 0.24
CDC7O00311 AC006557.2-201ENST00000592985 1240 ntBASIC16.57■□□□□ 0.24
CDC7O00311 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms