Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.73■□□□□ 0.27
TLR4O00206 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TLR4O00206 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TLR4O00206 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TLR4O00206 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TLR4O00206 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TLR4O00206 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TLR4O00206 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.73■□□□□ 0.27
TLR4O00206 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TLR4O00206 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TLR4O00206 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TLR4O00206 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TLR4O00206 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TLR4O00206 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
TLR4O00206 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TLR4O00206 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
TLR4O00206 AKAP8P1-201ENST00000434743 1349 ntBASIC16.72■□□□□ 0.27
TLR4O00206 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.72■□□□□ 0.27
TLR4O00206 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TLR4O00206 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.72■□□□□ 0.27
TLR4O00206 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.72■□□□□ 0.27
TLR4O00206 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.72■□□□□ 0.27
TLR4O00206 AC012569.1-201ENST00000591191 1524 ntBASIC16.72■□□□□ 0.27
TLR4O00206 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.72■□□□□ 0.27
TLR4O00206 AC243562.1-201ENST00000560672 389 ntBASIC16.72■□□□□ 0.27
TLR4O00206 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.72■□□□□ 0.27
TLR4O00206 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.72■□□□□ 0.27
TLR4O00206 AL096865.1-201ENST00000606796 927 ntBASIC16.72■□□□□ 0.27
TLR4O00206 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.72■□□□□ 0.27
TLR4O00206 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.72■□□□□ 0.27
TLR4O00206 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TLR4O00206 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.71■□□□□ 0.27
TLR4O00206 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TLR4O00206 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.71■□□□□ 0.27
TLR4O00206 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TLR4O00206 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.71■□□□□ 0.27
TLR4O00206 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TLR4O00206 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.71■□□□□ 0.27
TLR4O00206 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.71■□□□□ 0.27
TLR4O00206 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TLR4O00206 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.71■□□□□ 0.27
TLR4O00206 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.71■□□□□ 0.27
TLR4O00206 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 DUX4L17-201ENST00000557360 1267 ntBASIC16.71■□□□□ 0.27
TLR4O00206 AL135744.1-201ENST00000565098 629 ntBASIC16.71■□□□□ 0.27
TLR4O00206 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.71■□□□□ 0.27
TLR4O00206 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.71■□□□□ 0.27
TLR4O00206 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.71■□□□□ 0.27
TLR4O00206 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TLR4O00206 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TLR4O00206 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
TLR4O00206 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TLR4O00206 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
TLR4O00206 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.71■□□□□ 0.26
TLR4O00206 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TLR4O00206 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
TLR4O00206 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
TLR4O00206 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR4O00206 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR4O00206 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.7■□□□□ 0.26
TLR4O00206 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TLR4O00206 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
TLR4O00206 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms