Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 AC006538.1-201ENST00000567905 1585 ntBASIC16.98■□□□□ 0.31
TRIM49D1C9J1S8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 AL020989.1-201ENST00000422979 469 ntBASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 HLA-J-202ENST00000469281 1241 ntBASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 LINC01023-201ENST00000606054 436 ntBASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 AL121672.3-201ENST00000608644 468 ntBASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 AL021920.2-201ENST00000624828 1351 ntBASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM49D1C9J1S8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 AC004817.3-201ENST00000602957 2129 ntBASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRIM49D1C9J1S8 AC233702.3-201ENST00000578656 1387 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms