Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 CICP24-201ENST00000605464 2705 ntBASIC11.92□□□□□ -0.5
LINC01546A6NGU7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.92□□□□□ -0.5
LINC01546A6NGU7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 TSPY26P-202ENST00000565928 3884 ntBASIC11.92□□□□□ -0.5
LINC01546A6NGU7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 REXO1L8P-201ENST00000604378 1897 ntBASIC11.92□□□□□ -0.5
LINC01546A6NGU7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 ABHD17AP1-201ENST00000358206 933 ntBASIC11.92□□□□□ -0.5
LINC01546A6NGU7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC11.92□□□□□ -0.5
LINC01546A6NGU7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 FITM1-202ENST00000559294 800 ntBASIC11.92□□□□□ -0.5
LINC01546A6NGU7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 AC079602.3-201ENST00000623931 403 ntBASIC11.92□□□□□ -0.5
LINC01546A6NGU7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 AC092919.2-201ENST00000623631 1645 ntBASIC11.92□□□□□ -0.5
LINC01546A6NGU7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01546A6NGU7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 AL512652.2-201ENST00000625156 1716 ntBASIC11.91□□□□□ -0.5
LINC01546A6NGU7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 HLA-F-220ENST00000434407 884 ntBASIC11.91□□□□□ -0.5
LINC01546A6NGU7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 AC128676.1-201ENST00000454392 318 ntBASIC11.91□□□□□ -0.5
LINC01546A6NGU7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 C2orf69P3-201ENST00000565542 1120 ntBASIC11.91□□□□□ -0.5
LINC01546A6NGU7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 PGM5P2-202ENST00000637225 1043 ntBASIC11.91□□□□□ -0.5
LINC01546A6NGU7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 LINC01144-201ENST00000626198 1710 ntBASIC11.91□□□□□ -0.5
LINC01546A6NGU7 AC023908.3-201ENST00000564211 3047 ntBASIC11.91□□□□□ -0.5
LINC01546A6NGU7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
LINC01546A6NGU7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms