Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RCCD1A6NED2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RCCD1A6NED2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RCCD1A6NED2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 AP002414.4-201ENST00000589764 1148 ntBASIC17.98■□□□□ 0.47
RCCD1A6NED2 Z69720.1-201ENST00000601483 472 ntBASIC17.98■□□□□ 0.47
RCCD1A6NED2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RCCD1A6NED2 AC114341.1-201ENST00000618070 349 ntBASIC17.98■□□□□ 0.47
RCCD1A6NED2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 AC116407.4-201ENST00000623319 1061 ntBASIC17.98■□□□□ 0.47
RCCD1A6NED2 AL139011.1-202ENST00000642063 584 ntBASIC17.98■□□□□ 0.47
RCCD1A6NED2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RCCD1A6NED2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RCCD1A6NED2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RCCD1A6NED2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RCCD1A6NED2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RCCD1A6NED2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RCCD1A6NED2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 AL512652.2-201ENST00000625156 1716 ntBASIC17.98■□□□□ 0.47
RCCD1A6NED2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RCCD1A6NED2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.97■□□□□ 0.47
RCCD1A6NED2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RCCD1A6NED2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.97■□□□□ 0.47
RCCD1A6NED2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.97■□□□□ 0.47
RCCD1A6NED2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
RCCD1A6NED2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.97■□□□□ 0.47
RCCD1A6NED2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.97■□□□□ 0.47
RCCD1A6NED2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RCCD1A6NED2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.97■□□□□ 0.47
RCCD1A6NED2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RCCD1A6NED2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.97■□□□□ 0.47
RCCD1A6NED2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RCCD1A6NED2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RCCD1A6NED2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RCCD1A6NED2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RCCD1A6NED2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RCCD1A6NED2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RCCD1A6NED2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RCCD1A6NED2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RCCD1A6NED2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RCCD1A6NED2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RCCD1A6NED2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 TMPOP1-202ENST00000424642 1267 ntBASIC17.96■□□□□ 0.47
RCCD1A6NED2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RCCD1A6NED2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RCCD1A6NED2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 MIR3180-1-201ENST00000580374 94 ntBASIC17.96■□□□□ 0.47
RCCD1A6NED2 MIR3180-3-201ENST00000584616 94 ntBASIC17.96■□□□□ 0.47
RCCD1A6NED2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RCCD1A6NED2 AC079776.2-201ENST00000641154 1609 ntBASIC17.96■□□□□ 0.47
RCCD1A6NED2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RCCD1A6NED2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RCCD1A6NED2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RCCD1A6NED2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RCCD1A6NED2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms