Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.44■□□□□ 0.7
PALM3A6NDB9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PALM3A6NDB9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.44■□□□□ 0.7
PALM3A6NDB9 GPALPP1-207ENST00000611650 899 ntBASIC19.44■□□□□ 0.7
PALM3A6NDB9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.44■□□□□ 0.7
PALM3A6NDB9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PALM3A6NDB9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PALM3A6NDB9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PALM3A6NDB9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PALM3A6NDB9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PALM3A6NDB9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PALM3A6NDB9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PALM3A6NDB9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PALM3A6NDB9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.44■□□□□ 0.7
PALM3A6NDB9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PALM3A6NDB9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 KRT8P39-201ENST00000396270 1433 ntBASIC19.43■□□□□ 0.7
PALM3A6NDB9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PALM3A6NDB9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.43■□□□□ 0.7
PALM3A6NDB9 RNF216P1-203ENST00000404404 2427 ntBASIC19.43■□□□□ 0.7
PALM3A6NDB9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.43■□□□□ 0.7
PALM3A6NDB9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.43■□□□□ 0.7
PALM3A6NDB9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.43■□□□□ 0.7
PALM3A6NDB9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.43■□□□□ 0.7
PALM3A6NDB9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.43■□□□□ 0.7
PALM3A6NDB9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.43■□□□□ 0.7
PALM3A6NDB9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PALM3A6NDB9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.43■□□□□ 0.7
PALM3A6NDB9 AC134684.3-201ENST00000641758 218 ntBASIC19.43■□□□□ 0.7
PALM3A6NDB9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PALM3A6NDB9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PALM3A6NDB9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PALM3A6NDB9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.43■□□□□ 0.7
PALM3A6NDB9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PALM3A6NDB9 AC078925.2-201ENST00000624013 1973 ntBASIC19.43■□□□□ 0.7
PALM3A6NDB9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PALM3A6NDB9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PALM3A6NDB9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PALM3A6NDB9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PALM3A6NDB9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.42■□□□□ 0.7
PALM3A6NDB9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.42■□□□□ 0.7
PALM3A6NDB9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 AC211486.1-202ENST00000416371 468 ntBASIC19.42■□□□□ 0.7
PALM3A6NDB9 CEND1P1-201ENST00000451006 455 ntBASIC19.42■□□□□ 0.7
PALM3A6NDB9 AC211476.1-201ENST00000503899 468 ntBASIC19.42■□□□□ 0.7
PALM3A6NDB9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PALM3A6NDB9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.42■□□□□ 0.7
PALM3A6NDB9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PALM3A6NDB9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PALM3A6NDB9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PALM3A6NDB9 AL603756.1-201ENST00000606511 2163 ntBASIC19.42■□□□□ 0.7
PALM3A6NDB9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.41■□□□□ 0.7
PALM3A6NDB9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PALM3A6NDB9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms