Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 NPAP1P7-201ENST00000613027 823 ntBASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 AC009154.2-201ENST00000621177 724 ntBASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 KRT18P1-202ENST00000452408 1331 ntBASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 KRT18P65-201ENST00000439811 1286 ntBASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
AP4B1Q9Y6B7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 DRAXINP1-201ENST00000437611 948 ntBASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 AP002383.4-201ENST00000442518 975 ntBASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 RN7SL606P-201ENST00000472779 293 ntBASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 AP002414.4-201ENST00000589764 1148 ntBASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 AC092329.2-201ENST00000598402 547 ntBASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 AC124864.1-201ENST00000623408 392 ntBASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4B1Q9Y6B7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms