Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 AC103702.1-201ENST00000548801 2630 ntBASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 AL021920.2-201ENST00000624828 1351 ntBASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 AC139887.3-201ENST00000568585 713 ntBASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 PCDHA1-201ENST00000378133 2726 ntBASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 CLEC4GP1-201ENST00000596555 870 ntBASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 MTDHP4-201ENST00000600287 670 ntBASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 AL139424.1-201ENST00000607572 797 ntBASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA11Q9Y5H2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 KRT18P56-201ENST00000507275 550 ntBASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 SART3-203ENST00000546611 1184 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms