Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB13Q9Y5F0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB13Q9Y5F0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB13Q9Y5F0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB13Q9Y5F0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB13Q9Y5F0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB13Q9Y5F0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB13Q9Y5F0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB13Q9Y5F0 KRT8P49-201ENST00000604166 1432 ntBASIC18.73■□□□□ 0.59
PCDHB13Q9Y5F0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB13Q9Y5F0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB13Q9Y5F0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB13Q9Y5F0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 HSFY1P1-201ENST00000423928 1178 ntBASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 AC098831.1-202ENST00000438821 336 ntBASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 AP002490.2-201ENST00000524791 560 ntBASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB13Q9Y5F0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 AC002310.6-201ENST00000624451 1377 ntBASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 AC026396.1-201ENST00000419388 421 ntBASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB13Q9Y5F0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB13Q9Y5F0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB13Q9Y5F0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB13Q9Y5F0 TOP3BP1-201ENST00000420768 1380 ntBASIC18.7■□□□□ 0.58
PCDHB13Q9Y5F0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB13Q9Y5F0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHB13Q9Y5F0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHB13Q9Y5F0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHB13Q9Y5F0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB13Q9Y5F0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB13Q9Y5F0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB13Q9Y5F0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms