Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 AL139011.1-202ENST00000642063 584 ntBASIC17.52■□□□□ 0.4
SCML2Q9UQR0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SCML2Q9UQR0 SNX33P1-201ENST00000592116 1762 ntBASIC17.52■□□□□ 0.4
SCML2Q9UQR0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCML2Q9UQR0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SCML2Q9UQR0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCML2Q9UQR0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SCML2Q9UQR0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCML2Q9UQR0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SCML2Q9UQR0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCML2Q9UQR0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.52■□□□□ 0.39
SCML2Q9UQR0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SCML2Q9UQR0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCML2Q9UQR0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 AL645728.1-201ENST00000366221 2101 ntBASIC17.51■□□□□ 0.39
SCML2Q9UQR0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 WASH6P-202ENST00000359512 1437 ntBASIC17.51■□□□□ 0.39
SCML2Q9UQR0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 KRT8P39-201ENST00000396270 1433 ntBASIC17.51■□□□□ 0.39
SCML2Q9UQR0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 RN7SL589P-201ENST00000481268 310 ntBASIC17.51■□□□□ 0.39
SCML2Q9UQR0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 AL135744.1-201ENST00000565098 629 ntBASIC17.51■□□□□ 0.39
SCML2Q9UQR0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCML2Q9UQR0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 AC004461.1-201ENST00000412461 403 ntBASIC17.5■□□□□ 0.39
SCML2Q9UQR0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 SPDYE11-202ENST00000450699 704 ntBASIC17.5■□□□□ 0.39
SCML2Q9UQR0 TIMM8BP1-201ENST00000452384 211 ntBASIC17.5■□□□□ 0.39
SCML2Q9UQR0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 KRT8P48-201ENST00000515599 1220 ntBASIC17.5■□□□□ 0.39
SCML2Q9UQR0 AC243562.1-201ENST00000560672 389 ntBASIC17.5■□□□□ 0.39
SCML2Q9UQR0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 SPDYE9P-201ENST00000570642 692 ntBASIC17.5■□□□□ 0.39
SCML2Q9UQR0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 SPDYE10P-202ENST00000612005 668 ntBASIC17.5■□□□□ 0.39
SCML2Q9UQR0 SPDYE8P-202ENST00000612377 668 ntBASIC17.5■□□□□ 0.39
SCML2Q9UQR0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 AL671710.1-201ENST00000610245 2349 ntBASIC17.5■□□□□ 0.39
SCML2Q9UQR0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML2Q9UQR0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SCML2Q9UQR0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms