Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP25Q9UHP3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP25Q9UHP3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP25Q9UHP3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP25Q9UHP3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 AC092850.2-201ENST00000623821 2697 ntBASIC19.45■□□□□ 0.7
USP25Q9UHP3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP25Q9UHP3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP25Q9UHP3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP25Q9UHP3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP25Q9UHP3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP25Q9UHP3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP25Q9UHP3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
USP25Q9UHP3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP25Q9UHP3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP25Q9UHP3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.44■□□□□ 0.7
USP25Q9UHP3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP25Q9UHP3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
USP25Q9UHP3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP25Q9UHP3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP25Q9UHP3 POM121L3P-201ENST00000419331 1163 ntBASIC19.44■□□□□ 0.7
USP25Q9UHP3 IGHV3-47-201ENST00000425060 335 ntBASIC19.44■□□□□ 0.7
USP25Q9UHP3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
USP25Q9UHP3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP25Q9UHP3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.44■□□□□ 0.7
USP25Q9UHP3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.44■□□□□ 0.7
USP25Q9UHP3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
USP25Q9UHP3 AP002414.4-201ENST00000589764 1148 ntBASIC19.44■□□□□ 0.7
USP25Q9UHP3 BNIP3P18-201ENST00000593976 575 ntBASIC19.44■□□□□ 0.7
USP25Q9UHP3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.44■□□□□ 0.7
USP25Q9UHP3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP25Q9UHP3 NSUN5P1-202ENST00000421140 1535 ntBASIC19.44■□□□□ 0.7
USP25Q9UHP3 NSUN5P2-203ENST00000457352 1529 ntBASIC19.44■□□□□ 0.7
USP25Q9UHP3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.44■□□□□ 0.7
USP25Q9UHP3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP25Q9UHP3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP25Q9UHP3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP25Q9UHP3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.44■□□□□ 0.7
USP25Q9UHP3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP25Q9UHP3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP25Q9UHP3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
USP25Q9UHP3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP25Q9UHP3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP25Q9UHP3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP25Q9UHP3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP25Q9UHP3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP25Q9UHP3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 TOB2P1-201ENST00000469761 992 ntBASIC19.43■□□□□ 0.7
USP25Q9UHP3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP25Q9UHP3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 AC087388.1-201ENST00000571370 1112 ntBASIC19.43■□□□□ 0.7
USP25Q9UHP3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP25Q9UHP3 PMPCAP1-201ENST00000508114 1576 ntBASIC19.43■□□□□ 0.7
USP25Q9UHP3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP25Q9UHP3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP25Q9UHP3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP25Q9UHP3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP25Q9UHP3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.43■□□□□ 0.7
USP25Q9UHP3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP25Q9UHP3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP25Q9UHP3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP25Q9UHP3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP25Q9UHP3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP25Q9UHP3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP25Q9UHP3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP25Q9UHP3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms