Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 IL9RP2-201ENST00000423948 1312 ntBASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.64■□□□□ 0.42
PPARGC1AQ9UBK2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
PPARGC1AQ9UBK2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PPARGC1AQ9UBK2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PPARGC1AQ9UBK2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
PPARGC1AQ9UBK2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PPARGC1AQ9UBK2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 AL590627.1-203ENST00000421194 1026 ntBASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 AC145285.3-201ENST00000564603 959 ntBASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 AL139384.1-201ENST00000612143 3047 ntBASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PPARGC1AQ9UBK2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 FRMD8P1-201ENST00000440433 1524 ntBASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 RNA5SP415-201ENST00000517246 115 ntBASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 UNC93B6-202ENST00000528242 690 ntBASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 PI4KAP1-204ENST00000612579 1703 ntBASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PPARGC1AQ9UBK2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms