Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 AC024909.3-201ENST00000611513 2257 ntBASIC18.57■□□□□ 0.56
CALCOCO1Q9P1Z2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CALCOCO1Q9P1Z2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 AL160237.2-201ENST00000556165 472 ntBASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 Z69720.1-201ENST00000601483 472 ntBASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 AC099336.1-202ENST00000602961 463 ntBASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALCOCO1Q9P1Z2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALCOCO1Q9P1Z2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALCOCO1Q9P1Z2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CALCOCO1Q9P1Z2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.54■□□□□ 0.56
CALCOCO1Q9P1Z2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALCOCO1Q9P1Z2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.54■□□□□ 0.56
CALCOCO1Q9P1Z2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALCOCO1Q9P1Z2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CALCOCO1Q9P1Z2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.54■□□□□ 0.56
CALCOCO1Q9P1Z2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CALCOCO1Q9P1Z2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALCOCO1Q9P1Z2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALCOCO1Q9P1Z2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms