Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.27■□□□□ 0.04
NRIP3Q9NQ35 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.27■□□□□ 0.04
NRIP3Q9NQ35 AC132008.2-207ENST00000454517 770 ntBASIC15.27■□□□□ 0.04
NRIP3Q9NQ35 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.27■□□□□ 0.04
NRIP3Q9NQ35 KRT18P35-201ENST00000510488 1269 ntBASIC15.27■□□□□ 0.04
NRIP3Q9NQ35 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.27■□□□□ 0.04
NRIP3Q9NQ35 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.27■□□□□ 0.04
NRIP3Q9NQ35 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
NRIP3Q9NQ35 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.27■□□□□ 0.04
NRIP3Q9NQ35 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NRIP3Q9NQ35 AP001269.4-201ENST00000609611 512 ntBASIC15.27■□□□□ 0.04
NRIP3Q9NQ35 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.27■□□□□ 0.04
NRIP3Q9NQ35 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NRIP3Q9NQ35 AC006449.5-201ENST00000610658 2098 ntBASIC15.27■□□□□ 0.03
NRIP3Q9NQ35 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
NRIP3Q9NQ35 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NRIP3Q9NQ35 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NRIP3Q9NQ35 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.27■□□□□ 0.03
NRIP3Q9NQ35 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.27■□□□□ 0.03
NRIP3Q9NQ35 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NRIP3Q9NQ35 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NRIP3Q9NQ35 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.27■□□□□ 0.03
NRIP3Q9NQ35 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.27■□□□□ 0.03
NRIP3Q9NQ35 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NRIP3Q9NQ35 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NRIP3Q9NQ35 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NRIP3Q9NQ35 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 AC026691.1-201ENST00000602502 2017 ntBASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 AC106795.1-205ENST00000512851 1056 ntBASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 KRT8P49-201ENST00000604166 1432 ntBASIC15.26■□□□□ 0.03
NRIP3Q9NQ35 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 TERC-201ENST00000602385 541 ntBASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 AC138894.3-201ENST00000603787 634 ntBASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NRIP3Q9NQ35 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NRIP3Q9NQ35 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NRIP3Q9NQ35 AC243591.1-201ENST00000452967 1364 ntBASIC15.24■□□□□ 0.03
NRIP3Q9NQ35 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.24■□□□□ 0.03
NRIP3Q9NQ35 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NRIP3Q9NQ35 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.24■□□□□ 0.03
NRIP3Q9NQ35 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms