Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 FDX1P1-201ENST00000449115 551 ntBASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 AL662844.1-201ENST00000546340 181 ntBASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 AC104692.2-201ENST00000603054 253 ntBASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 AC064862.7-201ENST00000604520 867 ntBASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 AC097374.2-201ENST00000618617 1306 ntBASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMMDC1Q9NPL8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 FAM220CP-201ENST00000395253 831 ntBASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 AF238378.1-201ENST00000526806 358 ntBASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 AP002469.2-201ENST00000531724 424 ntBASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 PKD1P5-201ENST00000532415 10291 ntBASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMMDC1Q9NPL8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
TIMMDC1Q9NPL8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TIMMDC1Q9NPL8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TIMMDC1Q9NPL8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TIMMDC1Q9NPL8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TIMMDC1Q9NPL8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TIMMDC1Q9NPL8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.33■□□□□ 0.2
TIMMDC1Q9NPL8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.33■□□□□ 0.2
TIMMDC1Q9NPL8 RBM17P3-201ENST00000417687 1192 ntBASIC16.33■□□□□ 0.2
TIMMDC1Q9NPL8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TIMMDC1Q9NPL8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.33■□□□□ 0.2
TIMMDC1Q9NPL8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TIMMDC1Q9NPL8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.33■□□□□ 0.2
TIMMDC1Q9NPL8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.33■□□□□ 0.2
TIMMDC1Q9NPL8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms