Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 GPS2P2-201ENST00000430745 888 ntBASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 AC005498.2-205ENST00000593218 784 ntBASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 AC106028.4-201ENST00000614509 607 ntBASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 AC020763.4-201ENST00000623414 4170 ntBASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 WASH6P-202ENST00000359512 1437 ntBASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.97□□□□□ -0.01
KIAA1549Q9HCM3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 HLA-J-203ENST00000494367 1087 ntBASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 SPCS2P1-201ENST00000561636 679 ntBASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.96□□□□□ -0.01
KIAA1549Q9HCM3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.02
KIAA1549Q9HCM3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
KIAA1549Q9HCM3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
KIAA1549Q9HCM3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 AKAP8P1-201ENST00000434743 1349 ntBASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
KIAA1549Q9HCM3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms