Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.47■□□□□ 0.07
CHD8Q9HCK8 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CHD8Q9HCK8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 AL607033.1-201ENST00000623900 1599 ntBASIC15.46■□□□□ 0.07
CHD8Q9HCK8 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.46■□□□□ 0.07
CHD8Q9HCK8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 AL627389.1-201ENST00000413508 1182 ntBASIC15.46■□□□□ 0.07
CHD8Q9HCK8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 AC004461.2-201ENST00000629517 803 ntBASIC15.46■□□□□ 0.07
CHD8Q9HCK8 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.46■□□□□ 0.07
CHD8Q9HCK8 HLA-C-210ENST00000640219 976 ntBASIC15.46■□□□□ 0.07
CHD8Q9HCK8 LINC00895-201ENST00000629028 1637 ntBASIC15.46■□□□□ 0.07
CHD8Q9HCK8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHD8Q9HCK8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CHD8Q9HCK8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CHD8Q9HCK8 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.46■□□□□ 0.06
CHD8Q9HCK8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CHD8Q9HCK8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 BX284668.4-201ENST00000453917 508 ntBASIC15.45■□□□□ 0.06
CHD8Q9HCK8 HIST2H2BC-201ENST00000498492 580 ntBASIC15.45■□□□□ 0.06
CHD8Q9HCK8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 AC020765.3-201ENST00000613051 740 ntBASIC15.45■□□□□ 0.06
CHD8Q9HCK8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 FNTAP2-201ENST00000430308 634 ntBASIC15.45■□□□□ 0.06
CHD8Q9HCK8 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 AC097724.1-201ENST00000609581 426 ntBASIC15.45■□□□□ 0.06
CHD8Q9HCK8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 CU634019.7-201ENST00000624153 1185 ntBASIC15.45■□□□□ 0.06
CHD8Q9HCK8 FP236241.2-201ENST00000624906 1185 ntBASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms