Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC68Q9H2F9 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC68Q9H2F9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC68Q9H2F9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC68Q9H2F9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC68Q9H2F9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC68Q9H2F9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC68Q9H2F9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CCDC68Q9H2F9 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC68Q9H2F9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
CCDC68Q9H2F9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 PRYP5-201ENST00000451909 266 ntBASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 AC004817.3-201ENST00000602957 2129 ntBASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 NCF1C-201ENST00000438382 1427 ntBASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCDC68Q9H2F9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CCDC68Q9H2F9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17■□□□□ 0.31
CCDC68Q9H2F9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17■□□□□ 0.31
CCDC68Q9H2F9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17■□□□□ 0.31
CCDC68Q9H2F9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
CCDC68Q9H2F9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17■□□□□ 0.31
CCDC68Q9H2F9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17■□□□□ 0.31
CCDC68Q9H2F9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17■□□□□ 0.31
CCDC68Q9H2F9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17■□□□□ 0.31
CCDC68Q9H2F9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC68Q9H2F9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCDC68Q9H2F9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17■□□□□ 0.31
CCDC68Q9H2F9 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CCDC68Q9H2F9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC68Q9H2F9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 TUBB8P12-201ENST00000308911 1335 ntBASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 TUBB7P-202ENST00000428444 1305 ntBASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 TUBB8P7-204ENST00000567960 1332 ntBASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 AC068587.6-202ENST00000641839 5619 ntBASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC68Q9H2F9 TSPY19P-201ENST00000418461 509 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms