Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 CRYGEP-201ENST00000412192 528 ntBASIC17.81■□□□□ 0.44
LHX5Q9H2C1 HCG4B-203ENST00000450128 991 ntBASIC17.81■□□□□ 0.44
LHX5Q9H2C1 CXCL1P1-201ENST00000502804 216 ntBASIC17.81■□□□□ 0.44
LHX5Q9H2C1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 AC087641.1-201ENST00000557561 1021 ntBASIC17.81■□□□□ 0.44
LHX5Q9H2C1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX5Q9H2C1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.8■□□□□ 0.44
LHX5Q9H2C1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 CYP2A7P1-201ENST00000595391 815 ntBASIC17.8■□□□□ 0.44
LHX5Q9H2C1 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.8■□□□□ 0.44
LHX5Q9H2C1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 AP001350.2-201ENST00000625104 1094 ntBASIC17.8■□□□□ 0.44
LHX5Q9H2C1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 KRT8P39-201ENST00000396270 1433 ntBASIC17.8■□□□□ 0.44
LHX5Q9H2C1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LHX5Q9H2C1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 IGLL3P-201ENST00000412472 434 ntBASIC17.79■□□□□ 0.44
LHX5Q9H2C1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 AC034105.1-201ENST00000563488 319 ntBASIC17.79■□□□□ 0.44
LHX5Q9H2C1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 AC027601.4-201ENST00000611259 610 ntBASIC17.79■□□□□ 0.44
LHX5Q9H2C1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 AC139530.3-201ENST00000620344 690 ntBASIC17.79■□□□□ 0.44
LHX5Q9H2C1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LHX5Q9H2C1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms