Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
UPK3BQ9BT76 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
UPK3BQ9BT76 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
UPK3BQ9BT76 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
UPK3BQ9BT76 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
UPK3BQ9BT76 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.83□□□□□ -0.52
UPK3BQ9BT76 RNA5SP416-201ENST00000516838 111 ntBASIC11.83□□□□□ -0.52
UPK3BQ9BT76 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 AL135999.2-201ENST00000622438 1686 ntBASIC11.83□□□□□ -0.52
UPK3BQ9BT76 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 GATB-213ENST00000515812 1893 ntTSL 5 BASIC11.83□□□□□ -0.52
UPK3BQ9BT76 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 KRT18P3-201ENST00000451602 1288 ntBASIC11.82□□□□□ -0.52
UPK3BQ9BT76 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 AC140113.2-201ENST00000604370 208 ntBASIC11.82□□□□□ -0.52
UPK3BQ9BT76 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 AC023511.2-201ENST00000618803 211 ntBASIC11.82□□□□□ -0.52
UPK3BQ9BT76 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 AL118508.1-201ENST00000613502 2345 ntBASIC11.82□□□□□ -0.52
UPK3BQ9BT76 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UPK3BQ9BT76 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms