Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.12■□□□□ 0.17
CGREF1Q99674 HLA-J-202ENST00000469281 1241 ntBASIC16.12■□□□□ 0.17
CGREF1Q99674 AC091607.1-201ENST00000490318 1060 ntBASIC16.12■□□□□ 0.17
CGREF1Q99674 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.12■□□□□ 0.17
CGREF1Q99674 KRT8P26-201ENST00000534154 1276 ntBASIC16.12■□□□□ 0.17
CGREF1Q99674 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.12■□□□□ 0.17
CGREF1Q99674 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.12■□□□□ 0.17
CGREF1Q99674 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CGREF1Q99674 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CGREF1Q99674 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.12■□□□□ 0.17
CGREF1Q99674 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CGREF1Q99674 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.12■□□□□ 0.17
CGREF1Q99674 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.12■□□□□ 0.17
CGREF1Q99674 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 LINC00895-201ENST00000629028 1637 ntBASIC16.12■□□□□ 0.17
CGREF1Q99674 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGREF1Q99674 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.11■□□□□ 0.17
CGREF1Q99674 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.11■□□□□ 0.17
CGREF1Q99674 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 ME2P1-201ENST00000426028 1970 ntBASIC16.11■□□□□ 0.17
CGREF1Q99674 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.11■□□□□ 0.17
CGREF1Q99674 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CGREF1Q99674 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.11■□□□□ 0.17
CGREF1Q99674 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CGREF1Q99674 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.11■□□□□ 0.17
CGREF1Q99674 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.11■□□□□ 0.17
CGREF1Q99674 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CGREF1Q99674 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.11■□□□□ 0.17
CGREF1Q99674 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.11■□□□□ 0.17
CGREF1Q99674 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.11■□□□□ 0.17
CGREF1Q99674 ACTG1P4-201ENST00000425123 1122 ntBASIC16.11■□□□□ 0.17
CGREF1Q99674 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 AC104076.2-201ENST00000448912 469 ntBASIC16.11■□□□□ 0.17
CGREF1Q99674 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.11■□□□□ 0.17
CGREF1Q99674 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.11■□□□□ 0.17
CGREF1Q99674 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.11■□□□□ 0.17
CGREF1Q99674 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CGREF1Q99674 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.11■□□□□ 0.17
CGREF1Q99674 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CGREF1Q99674 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CGREF1Q99674 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CGREF1Q99674 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.11■□□□□ 0.17
CGREF1Q99674 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGREF1Q99674 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CGREF1Q99674 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGREF1Q99674 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
CGREF1Q99674 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGREF1Q99674 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGREF1Q99674 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CGREF1Q99674 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGREF1Q99674 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CGREF1Q99674 AC132872.4-202ENST00000622924 2756 ntBASIC16.1■□□□□ 0.17
CGREF1Q99674 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGREF1Q99674 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.1■□□□□ 0.17
CGREF1Q99674 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.1■□□□□ 0.17
CGREF1Q99674 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGREF1Q99674 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CGREF1Q99674 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGREF1Q99674 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CGREF1Q99674 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.1■□□□□ 0.17
CGREF1Q99674 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGREF1Q99674 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.1■□□□□ 0.17
CGREF1Q99674 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGREF1Q99674 AC006538.1-201ENST00000567905 1585 ntBASIC16.1■□□□□ 0.17
CGREF1Q99674 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGREF1Q99674 MTHFR-217ENST00000641820 1569 ntBASIC16.1■□□□□ 0.17
CGREF1Q99674 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGREF1Q99674 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.1■□□□□ 0.17
CGREF1Q99674 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGREF1Q99674 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGREF1Q99674 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms