Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AL021920.2-201ENST00000624828 1351 ntBASIC17.91■□□□□ 0.46
RAD9AQ99638 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD9AQ99638 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.91■□□□□ 0.46
RAD9AQ99638 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.91■□□□□ 0.46
RAD9AQ99638 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RAD9AQ99638 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD9AQ99638 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.91■□□□□ 0.46
RAD9AQ99638 KRT8P49-201ENST00000604166 1432 ntBASIC17.91■□□□□ 0.46
RAD9AQ99638 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD9AQ99638 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD9AQ99638 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.91■□□□□ 0.46
RAD9AQ99638 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.91■□□□□ 0.46
RAD9AQ99638 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.91■□□□□ 0.46
RAD9AQ99638 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD9AQ99638 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.91■□□□□ 0.46
RAD9AQ99638 FAM220BP-201ENST00000377689 816 ntBASIC17.91■□□□□ 0.46
RAD9AQ99638 DGCR5-201ENST00000399539 862 ntBASIC17.91■□□□□ 0.46
RAD9AQ99638 AC087499.6-201ENST00000411576 835 ntBASIC17.91■□□□□ 0.46
RAD9AQ99638 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
RAD9AQ99638 DFFBP1-201ENST00000433250 979 ntBASIC17.91■□□□□ 0.46
RAD9AQ99638 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RAD9AQ99638 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAD9AQ99638 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.91■□□□□ 0.46
RAD9AQ99638 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAD9AQ99638 AC135586.1-201ENST00000539323 574 ntBASIC17.91■□□□□ 0.46
RAD9AQ99638 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAD9AQ99638 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RAD9AQ99638 MIR4492-201ENST00000581627 80 ntBASIC17.91■□□□□ 0.46
RAD9AQ99638 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAD9AQ99638 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.91■□□□□ 0.46
RAD9AQ99638 AC017083.2-201ENST00000608069 979 ntBASIC17.91■□□□□ 0.46
RAD9AQ99638 AC004840.1-201ENST00000636359 365 ntBASIC17.91■□□□□ 0.46
RAD9AQ99638 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD9AQ99638 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RAD9AQ99638 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD9AQ99638 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.91■□□□□ 0.46
RAD9AQ99638 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD9AQ99638 AL391825.1-201ENST00000457671 1364 ntBASIC17.91■□□□□ 0.46
RAD9AQ99638 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD9AQ99638 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RAD9AQ99638 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
RAD9AQ99638 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RAD9AQ99638 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 AC133963.1-201ENST00000504166 1679 ntBASIC17.9■□□□□ 0.46
RAD9AQ99638 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RAD9AQ99638 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 BTBD7P1-201ENST00000447253 1453 ntBASIC17.9■□□□□ 0.46
RAD9AQ99638 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.9■□□□□ 0.46
RAD9AQ99638 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.9■□□□□ 0.46
RAD9AQ99638 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.9■□□□□ 0.46
RAD9AQ99638 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.9■□□□□ 0.46
RAD9AQ99638 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RAD9AQ99638 AP006294.1-201ENST00000415407 339 ntBASIC17.9■□□□□ 0.46
RAD9AQ99638 INE1-201ENST00000456273 945 ntBASIC17.9■□□□□ 0.46
RAD9AQ99638 AC010336.2-201ENST00000564226 506 ntBASIC17.9■□□□□ 0.46
RAD9AQ99638 AC104794.3-201ENST00000566840 1248 ntBASIC17.9■□□□□ 0.46
RAD9AQ99638 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.9■□□□□ 0.46
RAD9AQ99638 SPTSSB-204ENST00000617024 1292 ntBASIC17.9■□□□□ 0.46
RAD9AQ99638 AL162274.1-201ENST00000617191 1098 ntBASIC17.9■□□□□ 0.46
RAD9AQ99638 IGHV3-72-202ENST00000621503 303 ntBASIC17.9■□□□□ 0.46
RAD9AQ99638 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RAD9AQ99638 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAD9AQ99638 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.9■□□□□ 0.46
RAD9AQ99638 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RAD9AQ99638 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.89■□□□□ 0.46
RAD9AQ99638 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.89■□□□□ 0.46
RAD9AQ99638 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.89■□□□□ 0.45
RAD9AQ99638 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RAD9AQ99638 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAD9AQ99638 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.89■□□□□ 0.45
RAD9AQ99638 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.89■□□□□ 0.45
RAD9AQ99638 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAD9AQ99638 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.89■□□□□ 0.45
RAD9AQ99638 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAD9AQ99638 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RAD9AQ99638 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAD9AQ99638 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.89■□□□□ 0.45
RAD9AQ99638 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAD9AQ99638 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.89■□□□□ 0.45
RAD9AQ99638 AL512384.1-201ENST00000406683 331 ntBASIC17.89■□□□□ 0.45
RAD9AQ99638 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.89■□□□□ 0.45
RAD9AQ99638 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.89■□□□□ 0.45
RAD9AQ99638 RN7SL752P-201ENST00000463779 287 ntBASIC17.89■□□□□ 0.45
RAD9AQ99638 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.89■□□□□ 0.45
RAD9AQ99638 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
RAD9AQ99638 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAD9AQ99638 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms