Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 MED15P5-201ENST00000423150 992 ntBASIC14.05□□□□□ -0.16
GAFA1Q96PS6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 AC140113.2-201ENST00000604370 208 ntBASIC14.05□□□□□ -0.16
GAFA1Q96PS6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 AC027601.4-201ENST00000611259 610 ntBASIC14.05□□□□□ -0.16
GAFA1Q96PS6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.05□□□□□ -0.16
GAFA1Q96PS6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 NKILA-202ENST00000614771 2598 ntBASIC14.04□□□□□ -0.16
GAFA1Q96PS6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 HCG4-201ENST00000418983 998 ntBASIC14.04□□□□□ -0.16
GAFA1Q96PS6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 AC096734.2-201ENST00000562054 433 ntBASIC14.04□□□□□ -0.16
GAFA1Q96PS6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 AC009053.2-201ENST00000563701 2365 ntBASIC14.04□□□□□ -0.16
GAFA1Q96PS6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 OR6D1P-203ENST00000641209 4860 ntBASIC14.04□□□□□ -0.16
GAFA1Q96PS6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAFA1Q96PS6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 AL603756.1-201ENST00000606511 2163 ntBASIC14.03□□□□□ -0.16
GAFA1Q96PS6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAFA1Q96PS6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms