Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.33■□□□□ 0.04
APH1BQ8WW43 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
APH1BQ8WW43 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1BQ8WW43 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
APH1BQ8WW43 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
APH1BQ8WW43 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.33■□□□□ 0.04
APH1BQ8WW43 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
APH1BQ8WW43 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
APH1BQ8WW43 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
APH1BQ8WW43 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1BQ8WW43 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1BQ8WW43 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1BQ8WW43 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.33■□□□□ 0.04
APH1BQ8WW43 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1BQ8WW43 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1BQ8WW43 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APH1BQ8WW43 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.33■□□□□ 0.04
APH1BQ8WW43 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.33■□□□□ 0.04
APH1BQ8WW43 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 GGT3P-204ENST00000453783 1664 ntBASIC15.32■□□□□ 0.04
APH1BQ8WW43 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.32■□□□□ 0.04
APH1BQ8WW43 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.32■□□□□ 0.04
APH1BQ8WW43 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
APH1BQ8WW43 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.32■□□□□ 0.04
APH1BQ8WW43 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.32■□□□□ 0.04
APH1BQ8WW43 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
APH1BQ8WW43 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 AC005336.2-201ENST00000593183 939 ntBASIC15.32■□□□□ 0.04
APH1BQ8WW43 AC140113.3-201ENST00000605663 199 ntBASIC15.32■□□□□ 0.04
APH1BQ8WW43 KRT17P2-201ENST00000300992 1314 ntBASIC15.32■□□□□ 0.04
APH1BQ8WW43 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.32■□□□□ 0.04
APH1BQ8WW43 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.32■□□□□ 0.04
APH1BQ8WW43 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APH1BQ8WW43 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.32■□□□□ 0.04
APH1BQ8WW43 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 GGT4P-201ENST00000623672 1708 ntBASIC15.31■□□□□ 0.04
APH1BQ8WW43 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 FAM220CP-201ENST00000395253 831 ntBASIC15.31■□□□□ 0.04
APH1BQ8WW43 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 Z83836.1-201ENST00000624605 1642 ntBASIC15.31■□□□□ 0.04
APH1BQ8WW43 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 AC022532.1-201ENST00000624563 1728 ntBASIC15.31■□□□□ 0.04
APH1BQ8WW43 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
APH1BQ8WW43 AP005117.1-202ENST00000581724 1908 ntBASIC15.31■□□□□ 0.04
APH1BQ8WW43 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1BQ8WW43 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms